Detailed information NTG0516206

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KYK85_RS21625
• Genome accession: NZ_CP079992
• Coordinates: 4480578..4481603 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KMS2001
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4475578..4486603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYK85_RS21605 (KYK85_21545)	metJ	4476763..4477080 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KYK85_RS21610 (KYK85_21550)	yiiX	4477140..4477748 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
KYK85_RS21615 (KYK85_21555)	rpmE	4477809..4478021 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KYK85_RS21620 (KYK85_21560)	priA	4478224..4480422 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
KYK85_RS21625 (KYK85_21565)	cytR	4480578..4481603 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KYK85_RS21630 (KYK85_21570)	ftsN	4481695..4482654 (+)	960	WP_000068834.1	cell division protein FtsN	-
KYK85_RS21635 (KYK85_21575)	hslV	4482747..4483277 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
KYK85_RS21640 (KYK85_21580)	hslU	4483287..4484618 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KYK85_RS21645 (KYK85_21585)	menA	4484685..4485611 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KYK85_RS21650 (KYK85_21590)	rraA	4485704..4486189 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KYK85_RS21655 (KYK85_21595)	zapB	4486274..4486519 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=516206 KYK85_RS21625 WP_000644904.1 4480578..4481603(+) (cytR) [Escherichia coli strain KMS2001]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=516206 KYK85_RS21625 WP_000644904.1 4480578..4481603(+) (cytR) [Escherichia coli strain KMS2001]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628