Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6H76_RS03840 Genome accession   NZ_CP065994
Coordinates   764623..765348 (-) Length   241 a.a.
NCBI ID   WP_006531105.1    Uniprot ID   A0A380KN30
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 759623..770348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS03810 (I6H76_03810) - 759793..760449 (-) 657 WP_006531111.1 PilZ domain-containing protein -
  I6H76_RS10050 - 760551..760712 (-) 162 WP_006531110.1 hypothetical protein -
  I6H76_RS03815 (I6H76_03815) - 760718..761677 (-) 960 WP_231158954.1 sensor domain-containing diguanylate cyclase -
  I6H76_RS03825 (I6H76_03825) trmB 762081..762719 (-) 639 WP_006531108.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6H76_RS03830 (I6H76_03830) ccrZ 762719..763516 (-) 798 WP_014334332.1 cell cycle regulator CcrZ -
  I6H76_RS03835 (I6H76_03835) - 763586..764620 (-) 1035 WP_014334331.1 ABC transporter permease -
  I6H76_RS03840 (I6H76_03840) pptA 764623..765348 (-) 726 WP_006531105.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS03845 (I6H76_03845) - 765412..765831 (+) 420 WP_006531104.1 HIT family protein -
  I6H76_RS03850 (I6H76_03850) - 765828..766133 (+) 306 WP_006531103.1 hypothetical protein -
  I6H76_RS03855 (I6H76_03855) brpA 766219..767391 (-) 1173 WP_006531102.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6H76_RS03860 (I6H76_03860) - 767402..767914 (-) 513 WP_006531101.1 GNAT family N-acetyltransferase -
  I6H76_RS03865 (I6H76_03865) tsaE 767907..768350 (-) 444 WP_006531100.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6H76_RS03870 (I6H76_03870) - 768526..769947 (-) 1422 WP_006531099.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26808.28 Da        Isoelectric Point: 4.8809

>NTDB_id=516120 I6H76_RS03840 WP_006531105.1 764623..765348(-) (pptA) [Streptococcus infantarius strain FDAARGOS_1019]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
EMPSLYEELTLREHLETVAMAYDLDFDQAMARAKELLKLFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPHLFIVDEPF
LGLDPLAISDLTDLLAQEKSKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGKEDASLNDIYMALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=516120 I6H76_RS03840 WP_006531105.1 764623..765348(-) (pptA) [Streptococcus infantarius strain FDAARGOS_1019]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGCTAAATGGTGCTGGGAAATCAACGACGATTAATGAGGTTATCGGACTTTTGACACCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAATGCCAAGCTTGTATGAAGAGCTAACTTTACGTGAGCATTTAGAAACGGTTGCTATGGCTTATGATCTTGATTTTGA
TCAAGCAATGGCGCGTGCGAAAGAATTATTAAAACTTTTTCGTTTGTCTGATAAGCTTGAGTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAACAAAAGGTTATGATTGTCTGCGCCTTTATGATTGATCCTCATTTGTTTATCGTTGATGAGCCATTT
TTGGGACTAGATCCTTTGGCGATTTCTGATTTGACGGATTTGCTAGCGCAGGAAAAATCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGCTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGAAAAGAAGATGCTAGTTTGAACGATATTTACATGGCTTTAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380KN30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763
  pptA Streptococcus thermophilus LMD-9

75.732

99.17

0.751