Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6H76_RS03250 Genome accession   NZ_CP065994
Coordinates   652200..653285 (-) Length   361 a.a.
NCBI ID   WP_115283735.1    Uniprot ID   -
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 647200..658285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS03225 (I6H76_03225) - 648163..648669 (-) 507 WP_006531586.1 VanZ family protein -
  I6H76_RS03230 (I6H76_03230) rlmN 648679..649779 (-) 1101 WP_006531587.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I6H76_RS03235 (I6H76_03235) - 649800..650360 (-) 561 WP_043878306.1 YutD family protein -
  I6H76_RS03240 (I6H76_03240) - 650390..651718 (-) 1329 WP_043878307.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  I6H76_RS03245 (I6H76_03245) - 651821..652069 (-) 249 WP_014334393.1 DUF3923 family protein -
  I6H76_RS03250 (I6H76_03250) sepM 652200..653285 (-) 1086 WP_115283735.1 SepM family pheromone-processing serine protease Regulator
  I6H76_RS03255 (I6H76_03255) coaD 653263..653760 (-) 498 WP_006531592.1 pantetheine-phosphate adenylyltransferase -
  I6H76_RS03260 (I6H76_03260) rsmD 653792..654331 (-) 540 WP_043878312.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6H76_RS03265 (I6H76_03265) - 654461..655303 (+) 843 WP_006531594.1 hypothetical protein -
  I6H76_RS03270 (I6H76_03270) - 655476..656216 (+) 741 WP_006531595.1 hypothetical protein -
  I6H76_RS03275 (I6H76_03275) asnA 656345..657337 (-) 993 WP_006531596.1 aspartate--ammonia ligase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39159.50 Da        Isoelectric Point: 6.2878

>NTDB_id=516115 I6H76_RS03250 WP_115283735.1 652200..653285(-) (sepM) [Streptococcus infantarius strain FDAARGOS_1019]
MTILNAFKGILKKLGRILYRLKWWILGAVGTVFLIFSLFYPLDYYIEMPGGAYDVRSVLTVNKKADKDKGSYNFVAVSVS
QATLAQLIYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTVQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIQSDGSVGDIGGAGLKVVSAAKSGADIFFVPNNPVDKETLKK
DPDAKTNYEEAKEAAKDLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=516115 I6H76_RS03250 WP_115283735.1 652200..653285(-) (sepM) [Streptococcus infantarius strain FDAARGOS_1019]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTAAAATGGTGGATTTTAGG
GGCTGTGGGAACAGTTTTTCTCATCTTTAGTTTATTTTATCCACTTGATTATTACATTGAAATGCCAGGTGGTGCCTACG
ATGTTCGTAGTGTTTTAACGGTTAATAAAAAGGCTGATAAGGACAAAGGCTCTTACAACTTTGTAGCCGTGAGTGTGAGT
CAGGCAACCTTAGCTCAACTAATTTATGCTTGGTTAACACCGCATACAGAAATTTCAACTGCAGCTGCAACTACAGGTGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTATATGGAAACTTCACAAAATACAGCGACTTACCAAGCTTTAA
CCCTAGCAGGAAAAGACGTTAAGCTTGATTATCAAGGTGTCTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGTAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTGTTCAAGAAATTTCAAACGGTAAAACAAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGTATTGGTTTAGTCGATCATACCAAGGTGTCATCTGATGTCGATGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGACCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTCAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTGTTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
GATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGACCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.437

93.906

0.643