Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   I6I14_RS09470 Genome accession   NZ_CP065992
Coordinates   2076053..2077732 (+) Length   559 a.a.
NCBI ID   WP_010719788.1    Uniprot ID   A0A1V8X977
Organism   Enterococcus hirae strain FDAARGOS_1057     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2071053..2082732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I14_RS09440 (I6I14_09440) - 2071353..2072198 (+) 846 WP_010738206.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  I6I14_RS09445 (I6I14_09445) xseA 2072199..2073539 (+) 1341 WP_034698802.1 exodeoxyribonuclease VII large subunit -
  I6I14_RS09450 (I6I14_09450) - 2073545..2073769 (+) 225 WP_010719792.1 exodeoxyribonuclease VII small subunit -
  I6I14_RS09455 (I6I14_09455) - 2073769..2074653 (+) 885 WP_010719791.1 polyprenyl synthetase family protein -
  I6I14_RS09460 (I6I14_09460) - 2074668..2075486 (+) 819 WP_010738204.1 TlyA family RNA methyltransferase -
  I6I14_RS09465 (I6I14_09465) argR 2075586..2076035 (+) 450 WP_010719789.1 arginine repressor -
  I6I14_RS09470 (I6I14_09470) recN 2076053..2077732 (+) 1680 WP_010719788.1 DNA repair protein RecN Machinery gene
  I6I14_RS09475 (I6I14_09475) - 2077955..2078071 (-) 117 WP_010719787.1 DUF4044 domain-containing protein -
  I6I14_RS09480 (I6I14_09480) - 2078141..2079097 (-) 957 WP_010719786.1 magnesium transporter CorA family protein -
  I6I14_RS09485 (I6I14_09485) - 2079353..2079721 (+) 369 WP_010719785.1 DUF3397 domain-containing protein -
  I6I14_RS09490 (I6I14_09490) mraZ 2079893..2080324 (+) 432 WP_014834189.1 division/cell wall cluster transcriptional repressor MraZ -
  I6I14_RS09495 (I6I14_09495) rsmH 2080345..2081304 (+) 960 WP_034698806.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  I6I14_RS09500 (I6I14_09500) ftsL 2081309..2081704 (+) 396 WP_010719782.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 63022.25 Da        Isoelectric Point: 4.5725

>NTDB_id=516073 I6I14_RS09470 WP_010719788.1 2076053..2077732(+) (recN) [Enterococcus hirae strain FDAARGOS_1057]
MLQEISITNFAIIPELHLSFHKGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPSQEGFTELM
EELGIESDGDNLIVRRDMALTGKNVCRVNGHIVTLANLRRIGSYLVDIQGQNEHQELLQPEAHLNLLDRFGDRTFQQQKK
KYQKEYAIYRELERKMRKVQQNEKSFVQRIDMLHFQQEEIAAADLQVGEEEQLSEEREKLSNYQKIVDSFASGYSALSAG
EPSSVDNVGLAVSELQSIAHLDNEYEAIVENVQSAYYLLQDAIGDMSRQIDLLELDENRLEEVNQRLELIRQLKRKYGES
VEAILDYYEEITKELDSSDFSEGQLEKMQLELTKKETFLQEQALALHKTRKKIAKELEKSILTELKSLYMENTEFEVRFS
SEKNGQLDANGLDQVEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISCHSQVLCITHLPQVAAVADFQYYIQKEVIDGRTQTSVTELQPTQRETEIARMLAGSEITPLTVEHAKELLRLASK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=516073 I6I14_RS09470 WP_010719788.1 2076053..2077732(+) (recN) [Enterococcus hirae strain FDAARGOS_1057]
TTGTTACAAGAGATCAGTATTACTAATTTTGCGATTATTCCGGAATTGCATTTGTCTTTCCATAAAGGAATGACAGCTCT
AACTGGAGAGACCGGGGCAGGTAAATCGATTATCATTGATGCCCTTGGATTACTGGCTGGTGGTAGAGGCTCCAGTGATT
ATATTCGCCAAGGAGCCGATAAGTGTATCTTAGAAGGGTTGTTTGAATGGCCAAGTCAAGAAGGATTTACTGAATTGATG
GAAGAACTTGGCATCGAATCAGATGGTGATAACTTGATTGTTCGTCGTGATATGGCATTAACGGGTAAAAATGTCTGCCG
AGTCAATGGACATATTGTTACGCTGGCAAACCTTAGAAGGATCGGAAGTTATCTAGTTGATATTCAAGGACAAAATGAAC
ACCAGGAGCTATTACAACCAGAAGCCCATTTAAATTTATTGGATCGTTTTGGTGATCGTACTTTTCAACAACAAAAGAAA
AAATATCAAAAAGAGTATGCTATCTATCGTGAGCTCGAACGAAAAATGCGGAAAGTCCAACAAAATGAAAAATCATTTGT
TCAACGGATCGACATGCTTCATTTTCAACAAGAAGAAATCGCAGCAGCTGATTTACAAGTTGGCGAAGAGGAACAGTTAA
GCGAGGAAAGAGAAAAATTAAGCAATTATCAAAAGATCGTGGATAGTTTTGCTAGTGGTTATAGTGCATTGAGTGCGGGA
GAACCCAGTAGTGTGGATAACGTTGGTTTAGCTGTTTCTGAACTACAAAGCATTGCTCATCTAGATAATGAATATGAAGC
AATCGTTGAGAATGTTCAAAGTGCTTATTATTTACTTCAAGATGCCATTGGTGACATGAGTCGCCAAATCGATCTGCTGG
AATTGGATGAAAACCGATTAGAAGAAGTCAATCAACGGCTTGAATTGATTCGTCAGTTGAAACGCAAATATGGGGAGTCA
GTGGAAGCAATCCTTGATTATTACGAAGAAATCACTAAAGAACTGGATTCTTCTGATTTCTCAGAAGGTCAACTAGAAAA
AATGCAACTGGAATTAACTAAAAAAGAAACGTTCTTGCAAGAACAAGCATTAGCACTGCATAAAACAAGAAAAAAAATCG
CTAAAGAACTAGAAAAATCAATCTTAACGGAATTAAAAAGTCTATATATGGAAAACACGGAGTTTGAAGTCCGTTTTTCA
TCTGAAAAAAATGGACAATTAGATGCTAATGGATTGGACCAAGTGGAATTTTACATAACCACAAATCCTGGAGAACCATT
GAAGCCATTAGTAAAAGTTGCCTCAGGTGGGGAACTATCACGTATGTTGTTGGCGTTAAAAACTATTTTTTCTTCAGAAC
AAGGTGTGACTAGTATCATTTTTGATGAAGTGGATACAGGAGTAAGCGGTCGAGTTGCCCAAGCGATTGCAGATAAGATC
TCACAGATCTCATGTCACTCACAAGTTTTGTGTATCACCCATCTACCGCAAGTCGCTGCAGTTGCCGATTTTCAATACTA
TATTCAAAAAGAAGTCATTGATGGGCGTACCCAAACATCGGTTACCGAACTACAACCCACACAACGAGAGACCGAAATTG
CCCGAATGTTAGCAGGAAGTGAAATTACCCCACTAACAGTCGAGCATGCCAAAGAATTATTACGCTTAGCAAGTAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V8X977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.476

100

0.506