Detailed information NTG0516049

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KYK86_RS00815
• Genome accession: NZ_CP079991
• Coordinates: 173856..174839 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain KMS2005
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 168856..179839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYK86_RS00800 (KYK86_00800)	dppA	170156..171763 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
KYK86_RS00805 (KYK86_00805)	dppB	171914..172933 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KYK86_RS00810 (KYK86_00810)	dppC	172943..173845 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KYK86_RS00815 (KYK86_00815)	amiE	173856..174839 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
KYK86_RS00820 (KYK86_00820)	dppF	174836..175840 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KYK86_RS00825 (KYK86_00825)	yhjV	175870..177141 (-)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
KYK86_RS00830 (KYK86_00830)	-	177617..177724 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
KYK86_RS00835 (KYK86_00835)	-	178099..178206 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KYK86_RS00840 (KYK86_00840)	-	178582..178689 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=516049 KYK86_RS00815 WP_001196477.1 173856..174839(+) (amiE) [Escherichia coli strain KMS2005]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=516049 KYK86_RS00815 WP_001196477.1 173856..174839(+) (amiE) [Escherichia coli strain KMS2005]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404