Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   I6H71_RS02050 Genome accession   NZ_CP065980
Coordinates   438550..439518 (-) Length   322 a.a.
NCBI ID   WP_103210062.1    Uniprot ID   -
Organism   Staphylococcus felis strain FDAARGOS_1014     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 433550..444518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H71_RS02025 (I6H71_02025) - 434430..435059 (-) 630 WP_103210054.1 nitroreductase family protein -
  I6H71_RS02030 (I6H71_02030) - 435193..435633 (+) 441 WP_106465101.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H71_RS02035 (I6H71_02035) - 435749..436783 (-) 1035 WP_103210056.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  I6H71_RS02040 (I6H71_02040) - 436786..437604 (-) 819 WP_103210058.1 ABC transporter ATP-binding protein -
  I6H71_RS02045 (I6H71_02045) - 437601..438560 (-) 960 WP_103210060.1 iron chelate uptake ABC transporter family permease subunit -
  I6H71_RS02050 (I6H71_02050) ceuB 438550..439518 (-) 969 WP_103210062.1 ABC transporter permease Machinery gene
  I6H71_RS02055 (I6H71_02055) - 439722..439898 (-) 177 WP_167388987.1 hypothetical protein -
  I6H71_RS02060 (I6H71_02060) - 440120..440803 (-) 684 WP_103210063.1 LrgB family protein -
  I6H71_RS02065 (I6H71_02065) - 440803..441192 (-) 390 WP_232332032.1 CidA/LrgA family protein -
  I6H71_RS02070 (I6H71_02070) cidR 441309..442190 (-) 882 WP_103210067.1 cidABC operon transcriptional activator CidR -
  I6H71_RS02075 (I6H71_02075) - 442632..443054 (-) 423 WP_103210069.1 universal stress protein -
  I6H71_RS02080 (I6H71_02080) - 443271..444506 (+) 1236 WP_103207215.1 aminoacyltransferase -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35380.72 Da        Isoelectric Point: 9.7035

>NTDB_id=515854 I6H71_RS02050 WP_103210062.1 438550..439518(-) (ceuB) [Staphylococcus felis strain FDAARGOS_1014]
MRILMNGYVLLVILCILTVCSLFIGVSSVSVADVFRLDDKQLNILFASRIPRTVSILIAGSSLALSGLIMQQMMQNKFVS
PTTAGTMEWAKLGILISLIFFPSQHIFLKLIFAVLCSVIGTFLFVQIIQRIQFKDVVFVPLVGIMIGGIVSSFSTFIALQ
TNAVQSIGNWLNGNFAIITSGRYEVLYLSLPLLILTYVYANQFTIAGMGRDFSQSLGLNYQFVMNMGLMIIATITALVVV
TVGTLPFLGLIVPNIVAIFKGDHLKFALPHTAMLGAIFVMISDILGRLIVYPYEINIGLTIGVFGTVIFILMLMKGRHQY
AQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=515854 I6H71_RS02050 WP_103210062.1 438550..439518(-) (ceuB) [Staphylococcus felis strain FDAARGOS_1014]
ATGCGAATTTTAATGAATGGTTATGTTTTATTGGTCATCCTCTGTATTCTTACTGTTTGTTCCTTATTTATTGGTGTGAG
TAGTGTTTCGGTAGCGGATGTGTTTCGTTTGGATGATAAGCAACTTAATATTTTATTTGCTAGTCGTATTCCTAGAACGG
TAAGTATCCTTATTGCTGGTAGTAGCCTAGCTTTGTCAGGATTAATAATGCAACAGATGATGCAAAATAAATTCGTGAGT
CCGACGACTGCAGGAACGATGGAGTGGGCGAAACTTGGGATATTGATTTCGTTGATTTTTTTTCCATCGCAGCATATTTT
TTTGAAGCTCATCTTTGCGGTTCTCTGTAGTGTGATAGGAACATTTTTATTTGTTCAAATTATTCAACGTATTCAGTTTA
AAGACGTGGTTTTTGTCCCTTTAGTTGGCATTATGATAGGTGGTATTGTTTCTAGTTTTTCAACGTTTATCGCTTTACAA
ACAAATGCTGTACAAAGTATTGGAAACTGGTTAAATGGCAATTTTGCGATTATTACAAGTGGGCGATATGAAGTTTTATA
TCTTAGTTTACCGCTACTCATATTGACATATGTATACGCTAATCAGTTTACAATAGCAGGTATGGGACGTGATTTTAGCC
AAAGTTTAGGTTTGAATTATCAATTTGTTATGAATATGGGATTAATGATTATTGCAACAATTACTGCATTAGTTGTTGTA
ACTGTAGGAACGTTACCTTTTTTAGGTTTGATTGTCCCAAATATAGTAGCTATTTTTAAAGGTGATCACTTAAAGTTTGC
TTTGCCTCACACAGCGATGCTCGGAGCGATTTTTGTAATGATTTCAGATATTTTAGGTCGTTTAATCGTTTATCCATATG
AAATCAATATTGGTCTAACAATTGGTGTATTTGGAACTGTGATTTTCATCTTAATGTTGATGAAAGGGCGTCATCAATAT
GCACAATAA

Domains


Predicted by InterproScan.

(14-315)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.84

97.205

0.484