Detailed information NTG0515487

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KYX59_RS17580
• Genome accession: NZ_CP079780
• Coordinates: 3156441..3157466 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain BL12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3151441..3162466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYX59_RS17550 (KYX59_17460)	zapB	3151525..3151770 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KYX59_RS17555 (KYX59_17465)	rraA	3151855..3152340 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KYX59_RS17560 (KYX59_17470)	menA	3152433..3153359 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KYX59_RS17565 (KYX59_17475)	hslU	3153426..3154757 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KYX59_RS17570 (KYX59_17480)	hslV	3154767..3155297 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KYX59_RS17575 (KYX59_17485)	ftsN	3155390..3156349 (-)	960	WP_000068828.1	cell division protein FtsN	-
KYX59_RS17580 (KYX59_17490)	cytR	3156441..3157466 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KYX59_RS17585 (KYX59_17495)	priA	3157622..3159820 (-)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
KYX59_RS17590 (KYX59_17500)	rpmE	3160023..3160235 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KYX59_RS17595 (KYX59_17505)	yiiX	3160296..3160904 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KYX59_RS17600 (KYX59_17510)	metJ	3161088..3161405 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=515487 KYX59_RS17580 WP_000644904.1 3156441..3157466(-) (cytR) [Escherichia coli strain BL12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=515487 KYX59_RS17580 WP_000644904.1 3156441..3157466(-) (cytR) [Escherichia coli strain BL12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628