Detailed information NTG0515397

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KYX57_RS16150
• Genome accession: NZ_CP079772
• Coordinates: 3292956..3293981 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GS04
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3287956..3298981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYX57_RS16130 (KYX57_16080)	metJ	3289017..3289334 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KYX57_RS16135 (KYX57_16085)	yiiX	3289518..3290126 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KYX57_RS16140 (KYX57_16090)	rpmE	3290187..3290399 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KYX57_RS16145 (KYX57_16095)	priA	3290602..3292800 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
KYX57_RS16150 (KYX57_16100)	cytR	3292956..3293981 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KYX57_RS16155 (KYX57_16105)	ftsN	3294073..3295032 (+)	960	WP_000068828.1	cell division protein FtsN	-
KYX57_RS16160 (KYX57_16110)	hslV	3295125..3295655 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KYX57_RS16165 (KYX57_16115)	hslU	3295665..3296996 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KYX57_RS16170 (KYX57_16120)	menA	3297063..3297989 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KYX57_RS16175 (KYX57_16125)	rraA	3298082..3298567 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KYX57_RS16180 (KYX57_16130)	zapB	3298652..3298897 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=515397 KYX57_RS16150 WP_000644904.1 3292956..3293981(+) (cytR) [Escherichia coli strain GS04]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=515397 KYX57_RS16150 WP_000644904.1 3292956..3293981(+) (cytR) [Escherichia coli strain GS04]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628