Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   JAN99_RS08555 Genome accession   NZ_CP065927
Coordinates   1764356..1765069 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1759356..1770069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS08545 (JAN99_08540) treC 1760429..1762057 (-) 1629 WP_111693456.1 alpha,alpha-phosphotrehalase -
  JAN99_RS08550 (JAN99_08545) treP 1762124..1764145 (-) 2022 WP_136116205.1 PTS system trehalose-specific EIIBC component -
  JAN99_RS08555 (JAN99_08550) treR 1764356..1765069 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  JAN99_RS08560 (JAN99_08555) - 1765348..1765614 (-) 267 WP_076637095.1 winged helix-turn-helix transcriptional regulator -
  JAN99_RS08565 (JAN99_08560) - 1765872..1766729 (+) 858 WP_111693459.1 VOC family protein -
  JAN99_RS08570 (JAN99_08565) yaaA 1766771..1767502 (+) 732 WP_136117292.1 peroxide stress protein YaaA -
  JAN99_RS08575 (JAN99_08570) nrdG 1767676..1768290 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  JAN99_RS08580 (JAN99_08575) - 1768290..1768799 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  JAN99_RS08585 (JAN99_08580) - 1768808..1769743 (-) 936 WP_111693460.1 Gfo/Idh/MocA family oxidoreductase -
  JAN99_RS08590 (JAN99_08585) - 1769772..1769918 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=515386 JAN99_RS08555 WP_002992823.1 1764356..1765069(+) (treR) [Streptococcus pyogenes strain emm9ST603]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=515386 JAN99_RS08555 WP_002992823.1 1764356..1765069(+) (treR) [Streptococcus pyogenes strain emm9ST603]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675