Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   JAN99_RS02260 Genome accession   NZ_CP065927
Coordinates   439307..440032 (+) Length   241 a.a.
NCBI ID   WP_198463004.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 434307..445032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS02230 (JAN99_02225) - 434486..435946 (+) 1461 WP_002988645.1 NCS2 family permease -
  JAN99_RS02235 (JAN99_02230) tsaE 436100..436561 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JAN99_RS02240 (JAN99_02235) - 436536..437060 (+) 525 WP_063811834.1 N-acetyltransferase -
  JAN99_RS02245 (JAN99_02240) - 437069..438352 (+) 1284 WP_111693352.1 LCP family protein -
  JAN99_RS02250 (JAN99_02245) - 438463..438819 (-) 357 WP_030126323.1 hypothetical protein -
  JAN99_RS02255 (JAN99_02250) - 438816..439235 (-) 420 WP_002983376.1 HIT family protein -
  JAN99_RS02260 (JAN99_02255) pptA 439307..440032 (+) 726 WP_198463004.1 ABC transporter ATP-binding protein Regulator
  JAN99_RS02265 (JAN99_02260) - 440035..441069 (+) 1035 WP_010922583.1 ABC transporter permease -
  JAN99_RS02270 (JAN99_02265) - 441133..441924 (+) 792 WP_002983385.1 phosphotransferase family protein -
  JAN99_RS02275 (JAN99_02270) trmB 441924..442559 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  JAN99_RS02285 (JAN99_02280) rimP 442818..443354 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  JAN99_RS02290 (JAN99_02285) nusA 443529..444686 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  JAN99_RS02295 (JAN99_02290) - 444702..444998 (+) 297 WP_002983486.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26691.74 Da        Isoelectric Point: 4.6439

>NTDB_id=515359 JAN99_RS02260 WP_198463004.1 439307..440032(+) (pptA) [Streptococcus pyogenes strain emm9ST603]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQSFLEMFRLTDKLEWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=515359 JAN99_RS02260 WP_198463004.1 439307..440032(+) (pptA) [Streptococcus pyogenes strain emm9ST603]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAATCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCCATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGATTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714