Detailed information NTG0515233

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KX927_RS18075
• Genome accession: NZ_CP079767
• Coordinates: 3232741..3233766 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SF10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3227741..3238766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KX927_RS18055 (KX927_17945)	metJ	3228802..3229119 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KX927_RS18060 (KX927_17950)	yiiX	3229303..3229911 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KX927_RS18065 (KX927_17955)	rpmE	3229972..3230184 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KX927_RS18070 (KX927_17960)	priA	3230387..3232585 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KX927_RS18075 (KX927_17965)	cytR	3232741..3233766 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KX927_RS18080 (KX927_17970)	ftsN	3233858..3234817 (+)	960	WP_000068828.1	cell division protein FtsN	-
KX927_RS18085 (KX927_17975)	hslV	3234910..3235440 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KX927_RS18090 (KX927_17980)	hslU	3235450..3236781 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KX927_RS18095 (KX927_17985)	menA	3236848..3237774 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KX927_RS18100 (KX927_17990)	rraA	3237867..3238352 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KX927_RS18105 (KX927_17995)	zapB	3238437..3238682 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=515233 KX927_RS18075 WP_000644904.1 3232741..3233766(+) (cytR) [Escherichia coli strain SF10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=515233 KX927_RS18075 WP_000644904.1 3232741..3233766(+) (cytR) [Escherichia coli strain SF10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628