Detailed information NTG0514981

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KXJ73_RS20855
• Genome accession: NZ_CP079747
• Coordinates: 4298979..4300004 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DL21
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4293979..4305004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KXJ73_RS20830 (KXJ73_20820)	metJ	4294417..4294734 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KXJ73_RS20835 (KXJ73_20825)	yiiX	4294918..4295526 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
KXJ73_RS20840 (KXJ73_20830)	-	4295533..4296156 (+)	624	WP_000720774.1	TIGR02117 family protein	-
KXJ73_RS20845 (KXJ73_20835)	rpmE	4296210..4296422 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KXJ73_RS20850 (KXJ73_20840)	priA	4296625..4298823 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KXJ73_RS20855 (KXJ73_20845)	cytR	4298979..4300004 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KXJ73_RS20860 (KXJ73_20850)	ftsN	4300096..4301055 (+)	960	WP_000068828.1	cell division protein FtsN	-
KXJ73_RS20865 (KXJ73_20855)	hslV	4301148..4301678 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KXJ73_RS20870 (KXJ73_20860)	hslU	4301688..4303019 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KXJ73_RS20875 (KXJ73_20865)	menA	4303086..4304012 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KXJ73_RS20880 (KXJ73_20870)	rraA	4304105..4304590 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KXJ73_RS20885 (KXJ73_20875)	zapB	4304675..4304920 (-)	246	WP_219192977.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=514981 KXJ73_RS20855 WP_000644904.1 4298979..4300004(+) (cytR) [Escherichia coli strain DL21]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=514981 KXJ73_RS20855 WP_000644904.1 4298979..4300004(+) (cytR) [Escherichia coli strain DL21]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628