Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SSUST1_RS07660 Genome accession   NC_017950
Coordinates   1524929..1525978 (-) Length   349 a.a.
NCBI ID   WP_014736227.1    Uniprot ID   A0A0Z8PJI1
Organism   Streptococcus suis ST1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1519929..1530978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUST1_RS07640 (SSUST1_1562) nadE 1520596..1521420 (+) 825 WP_014736225.1 ammonia-dependent NAD(+) synthetase -
  SSUST1_RS07645 (SSUST1_1563) - 1522455..1522982 (-) 528 WP_002942846.1 VanZ family protein -
  SSUST1_RS07650 (SSUST1_1564) rlmN 1522979..1524091 (-) 1113 WP_014736226.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SSUST1_RS07655 (SSUST1_1565) - 1524100..1524741 (-) 642 WP_014638483.1 YutD family protein -
  SSUST1_RS07660 (SSUST1_1566) sepM 1524929..1525978 (-) 1050 WP_014736227.1 SepM family pheromone-processing serine protease Regulator
  SSUST1_RS07665 (SSUST1_1567) coaD 1525965..1526453 (-) 489 WP_014736228.1 pantetheine-phosphate adenylyltransferase -
  SSUST1_RS07670 (SSUST1_1568) rsmD 1526443..1526982 (-) 540 WP_014638485.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SSUST1_RS07675 (SSUST1_1569) - 1527291..1528013 (-) 723 WP_014736229.1 hypothetical protein -
  SSUST1_RS07680 (SSUST1_1570) - 1528070..1528456 (-) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  SSUST1_RS07685 (SSUST1_1571) - 1528456..1528674 (-) 219 WP_032512480.1 YqgQ family protein -
  SSUST1_RS07690 (SSUST1_1572) - 1528958..1529506 (-) 549 WP_014736231.1 response regulator transcription factor -
  SSUST1_RS07695 (SSUST1_1573) - 1529503..1530597 (-) 1095 WP_014736232.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37775.85 Da        Isoelectric Point: 4.6112

>NTDB_id=51484 SSUST1_RS07660 WP_014736227.1 1524929..1525978(-) (sepM) [Streptococcus suis ST1]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIARFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALTDDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=51484 SSUST1_RS07660 WP_014736227.1 1524929..1525978(-) (sepM) [Streptococcus suis ST1]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAGGAGTATTTCCGTATAGCACGGTTTTACAT
GGAAACTTCGCAAAATATGGCGAAGTATCAAGGATTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTGCTTGCCTTGACGGATGATTCAACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAACTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGGATAGGTATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGGATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTCATTTCGGCAGCTAAGTCTGGTGCAAGTATCTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAACCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACAAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8PJI1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

61.095

99.427

0.607


Multiple sequence alignment