Detailed information NTG0514830

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KYX13_RS21030
• Genome accession: NZ_CP079736
• Coordinates: 4311119..4312144 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GB2005-delet-a-f
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4306119..4317144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYX13_RS21010 (KYX13_21010)	metJ	4307180..4307497 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KYX13_RS21015 (KYX13_21015)	yiiX	4307681..4308289 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KYX13_RS21020 (KYX13_21020)	rpmE	4308350..4308562 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KYX13_RS21025 (KYX13_21025)	priA	4308765..4310963 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KYX13_RS21030 (KYX13_21030)	cytR	4311119..4312144 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KYX13_RS21035 (KYX13_21035)	ftsN	4312236..4313195 (+)	960	WP_000068828.1	cell division protein FtsN	-
KYX13_RS21040 (KYX13_21040)	hslV	4313288..4313818 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KYX13_RS21045 (KYX13_21045)	hslU	4313828..4315159 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KYX13_RS21050 (KYX13_21050)	menA	4315226..4316152 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KYX13_RS21055 (KYX13_21055)	rraA	4316245..4316730 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KYX13_RS21060 (KYX13_21060)	zapB	4316815..4317060 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=514830 KYX13_RS21030 WP_000644904.1 4311119..4312144(+) (cytR) [Escherichia coli strain GB2005-delet-a-f]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=514830 KYX13_RS21030 WP_000644904.1 4311119..4312144(+) (cytR) [Escherichia coli strain GB2005-delet-a-f]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628