Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I7831_RS09025 | Genome accession | NZ_CP065797 |
| Coordinates | 1817973..1818947 (+) | Length | 324 a.a. |
| NCBI ID | WP_194440726.1 | Uniprot ID | - |
| Organism | Staphylococcus saprophyticus strain GDY8P168P | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1812973..1823947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I7831_RS08990 (I7831_08990) | rpmG | 1813393..1813542 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| I7831_RS08995 (I7831_08995) | - | 1813751..1814296 (+) | 546 | WP_041080616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| I7831_RS09000 (I7831_09000) | - | 1814308..1815765 (+) | 1458 | WP_194375707.1 | rhomboid family intramembrane serine protease | - |
| I7831_RS09005 (I7831_09005) | - | 1815749..1815946 (+) | 198 | WP_041080619.1 | YqgQ family protein | - |
| I7831_RS09010 (I7831_09010) | - | 1815950..1816936 (+) | 987 | WP_041080621.1 | glucokinase | - |
| I7831_RS09015 (I7831_09015) | - | 1816936..1817262 (+) | 327 | WP_002483185.1 | MTH1187 family thiamine-binding protein | - |
| I7831_RS09020 (I7831_09020) | - | 1817262..1817885 (+) | 624 | WP_041080623.1 | MBL fold metallo-hydrolase | - |
| I7831_RS09025 (I7831_09025) | comGA | 1817973..1818947 (+) | 975 | WP_194440726.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I7831_RS09030 (I7831_09030) | comGB | 1818919..1819983 (+) | 1065 | WP_041080625.1 | competence type IV pilus assembly protein ComGB | - |
| I7831_RS09035 (I7831_09035) | comGC | 1820011..1820322 (+) | 312 | WP_037538386.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I7831_RS09040 (I7831_09040) | comGD | 1820303..1820758 (+) | 456 | WP_232334845.1 | competence type IV pilus minor pilin ComGD | - |
| I7831_RS09045 (I7831_09045) | comGF | 1821016..1821459 (+) | 444 | WP_002483191.1 | competence type IV pilus minor pilin ComGF | - |
| I7831_RS09050 (I7831_09050) | - | 1821663..1822136 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| I7831_RS09055 (I7831_09055) | gcvT | 1822320..1823411 (+) | 1092 | WP_041080630.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36605.90 Da Isoelectric Point: 9.8524
>NTDB_id=514677 I7831_RS09025 WP_194440726.1 1817973..1818947(+) (comGA) [Staphylococcus saprophyticus strain GDY8P168P]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINKKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINKKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
Nucleotide
Download Length: 975 bp
>NTDB_id=514677 I7831_RS09025 WP_194440726.1 1817973..1818947(+) (comGA) [Staphylococcus saprophyticus strain GDY8P168P]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATAAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATAAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.037 |
100 |
0.62 |
| comGA | Staphylococcus aureus N315 |
62.037 |
100 |
0.62 |