Detailed information NTG0051465

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HIFGL_RS01730
• Genome accession: NC_022356
• Coordinates: 352568..353572 (-)
• Length: 334 a.a.
• NCBI ID: WP_005688661.1
• Uniprot ID: -
• Organism: Haemophilus influenzae KR494
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 347568..358572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HIFGL_RS01705 (HifGL_000338)	tehA	348546..349490 (+)	945	WP_041175265.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
HIFGL_RS01710 (HifGL_000339)	tsaA	349543..350262 (-)	720	WP_021034612.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
HIFGL_RS01715 (HifGL_000340)	menA	350324..351235 (+)	912	WP_021034613.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
HIFGL_RS01720 (HifGL_000341)	rraA	351287..351775 (+)	489	WP_021034614.1	ribonuclease E activity regulator RraA	-
HIFGL_RS01725 (HifGL_000342)	-	351907..352458 (-)	552	WP_005632696.1	TIGR00645 family protein	-
HIFGL_RS01730 (HifGL_000343)	cytR	352568..353572 (-)	1005	WP_005688661.1	substrate-binding domain-containing protein	Regulator
HIFGL_RS01735 (HifGL_000344)	rbsK	353600..354520 (-)	921	WP_021034615.1	ribokinase	-
HIFGL_RS01740 (HifGL_000345)	rbsB	354618..355496 (-)	879	WP_021034616.1	ribose ABC transporter substrate-binding protein RbsB	-
HIFGL_RS01745 (HifGL_000346)	rbsC	355516..356484 (-)	969	WP_041175266.1	ribose ABC transporter permease	-
HIFGL_RS01750 (HifGL_000347)	rbsA	356500..357981 (-)	1482	WP_021034618.1	ribose ABC transporter ATP-binding protein RbsA	-
HIFGL_RS01755 (HifGL_000348)	rbsD	357995..358414 (-)	420	WP_021034619.1	D-ribose pyranase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36788.46 Da
• Isoelectric Point: 7.6607

>NTDB_id=51465 HIFGL_RS01730 WP_005688661.1 352568..353572(-) (cytR) [Haemophilus influenzae KR494]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELTISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVEALLQRIKNPNENYRTLVLEP
TCILRGSISTPSNI

Nucleotide

• Length: 1005 bp

>NTDB_id=51465 HIFGL_RS01730 WP_005688661.1 352568..353572(-) (cytR) [Haemophilus influenzae KR494]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGAGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGCAGCATCAATATAATCTTATTATTGCCACCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTGTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAACCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAATTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTCCTTGGTATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTTGCTGTAGAAGCACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTAGTGTTAGAGCCG
ACCTGTATTTTGAGAGGATCAATTTCTACCCCTTCAAACATATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.048	99.401	0.368
cytR	Vibrio cholerae C6706	36.228	100	0.362