Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   I8N73_RS15860 Genome accession   NZ_CP065791
Coordinates   3227809..3230115 (-) Length   768 a.a.
NCBI ID   WP_199022126.1    Uniprot ID   -
Organism   Bacillus velezensis strain LBUM279     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3222809..3235115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N73_RS15820 (I8N73_15820) - 3223269..3223700 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  I8N73_RS15825 (I8N73_15825) - 3223700..3224041 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  I8N73_RS15830 (I8N73_15830) - 3224034..3225515 (+) 1482 WP_199022125.1 Na+/H+ antiporter subunit D -
  I8N73_RS15835 (I8N73_15835) - 3225521..3225997 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  I8N73_RS15840 (I8N73_15840) - 3225997..3226281 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  I8N73_RS15845 (I8N73_15845) mnhG 3226265..3226639 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  I8N73_RS15850 (I8N73_15850) - 3226679..3227062 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  I8N73_RS15855 (I8N73_15855) comA 3227084..3227728 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  I8N73_RS15860 (I8N73_15860) comP 3227809..3230115 (-) 2307 WP_199022126.1 sensor histidine kinase Regulator
  I8N73_RS15865 (I8N73_15865) comX 3230134..3230310 (-) 177 WP_015240484.1 competence pheromone ComX -
  I8N73_RS15870 (I8N73_15870) - 3230325..3231200 (-) 876 WP_025285191.1 polyprenyl synthetase family protein -
  I8N73_RS15875 (I8N73_15875) degQ 3231352..3231492 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  I8N73_RS15880 (I8N73_15880) - 3231958..3232299 (+) 342 WP_007408677.1 hypothetical protein -
  I8N73_RS15885 (I8N73_15885) - 3232306..3233529 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89513.81 Da        Isoelectric Point: 8.4115

>NTDB_id=514569 I8N73_RS15860 WP_199022126.1 3227809..3230115(-) (comP) [Bacillus velezensis strain LBUM279]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKIPTEENI
KGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEIFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLITNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEKDGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=514569 I8N73_RS15860 WP_199022126.1 3227809..3230115(-) (comP) [Bacillus velezensis strain LBUM279]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTTGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTACAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAATACCGACAGAAGAGAATATA
AAAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGCTTGTTGTGTATTT
TTTACATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCACTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGATATTCCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATAACTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TATTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCGTTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGAAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTAAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAAAAGACGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594