Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   I8N73_RS07415 Genome accession   NZ_CP065791
Coordinates   1449308..1449904 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain LBUM279     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444308..1454904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N73_RS07385 (I8N73_07385) - 1444521..1444976 (+) 456 WP_199022503.1 flavodoxin -
  I8N73_RS07390 (I8N73_07390) dapD 1445058..1445768 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  I8N73_RS07395 (I8N73_07395) - 1445839..1446963 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  I8N73_RS07400 (I8N73_07400) - 1447024..1447269 (+) 246 WP_003154596.1 YkuS family protein -
  I8N73_RS07405 (I8N73_07405) - 1447303..1448109 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  I8N73_RS07410 (I8N73_07410) - 1448397..1448855 (+) 459 WP_095353001.1 TlpA disulfide reductase family protein -
  I8N73_RS07415 (I8N73_07415) rok 1449308..1449904 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  I8N73_RS07420 (I8N73_07420) - 1449925..1450917 (-) 993 WP_012117448.1 hypothetical protein -
  I8N73_RS07425 (I8N73_07425) - 1451063..1451665 (+) 603 WP_052827374.1 molybdenum cofactor guanylyltransferase -
  I8N73_RS07430 (I8N73_07430) - 1451717..1452736 (+) 1020 WP_094032403.1 molybdopterin-synthase adenylyltransferase MoeB -
  I8N73_RS07435 (I8N73_07435) glp 1452754..1454046 (+) 1293 WP_033574615.1 gephyrin-like molybdotransferase Glp -
  I8N73_RS07440 (I8N73_07440) mobB 1454007..1454528 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=514540 I8N73_RS07415 WP_012117447.1 1449308..1449904(+) (rok) [Bacillus velezensis strain LBUM279]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=514540 I8N73_RS07415 WP_012117447.1 1449308..1449904(+) (rok) [Bacillus velezensis strain LBUM279]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843