Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   I8N73_RS07315 Genome accession   NZ_CP065791
Coordinates   1433441..1433905 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain LBUM279     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1428441..1438905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N73_RS07295 (I8N73_07295) - 1428921..1430741 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  I8N73_RS07300 (I8N73_07300) - 1430722..1431935 (-) 1214 Protein_1388 aminotransferase A -
  I8N73_RS07305 (I8N73_07305) - 1432136..1432297 (-) 162 WP_007409608.1 hypothetical protein -
  I8N73_RS07310 (I8N73_07310) cheV 1432486..1433397 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  I8N73_RS07315 (I8N73_07315) kre 1433441..1433905 (-) 465 WP_003154622.1 YkyB family protein Regulator
  I8N73_RS07320 (I8N73_07320) - 1434028..1435320 (-) 1293 WP_032871353.1 MFS transporter -
  I8N73_RS07325 (I8N73_07325) - 1435396..1435890 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  I8N73_RS07330 (I8N73_07330) - 1435965..1436828 (-) 864 WP_199022501.1 metallophosphoesterase -
  I8N73_RS07335 (I8N73_07335) fadH 1436973..1437737 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  I8N73_RS07340 (I8N73_07340) - 1437851..1438399 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=514539 I8N73_RS07315 WP_003154622.1 1433441..1433905(-) (kre) [Bacillus velezensis strain LBUM279]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=514539 I8N73_RS07315 WP_003154622.1 1433441..1433905(-) (kre) [Bacillus velezensis strain LBUM279]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929