Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I8N73_RS05900 Genome accession   NZ_CP065791
Coordinates   1174352..1174543 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain LBUM279     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1169352..1179543
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N73_RS05870 (I8N73_05870) argF 1170204..1171175 (+) 972 WP_031378491.1 ornithine carbamoyltransferase -
  I8N73_RS05875 (I8N73_05875) - 1171251..1171430 (+) 180 WP_003155070.1 YjzC family protein -
  I8N73_RS05880 (I8N73_05880) - 1171467..1171652 (-) 186 WP_003155069.1 YjzD family protein -
  I8N73_RS05885 (I8N73_05885) - 1171913..1172647 (+) 735 WP_094032933.1 hypothetical protein -
  I8N73_RS05890 (I8N73_05890) - 1172730..1173296 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  I8N73_RS05895 (I8N73_05895) med 1173386..1174339 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  I8N73_RS05900 (I8N73_05900) comZ 1174352..1174543 (+) 192 WP_003155061.1 ComZ family protein Regulator
  I8N73_RS05905 (I8N73_05905) - 1174572..1174790 (-) 219 WP_007409123.1 hypothetical protein -
  I8N73_RS05910 (I8N73_05910) - 1174958..1175896 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  I8N73_RS05915 (I8N73_05915) fabF 1175919..1177157 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  I8N73_RS05920 (I8N73_05920) - 1177240..1178025 (+) 786 WP_061046904.1 DUF2268 domain-containing protein -
  I8N73_RS05925 (I8N73_05925) - 1178199..1179185 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=514532 I8N73_RS05900 WP_003155061.1 1174352..1174543(+) (comZ) [Bacillus velezensis strain LBUM279]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=514532 I8N73_RS05900 WP_003155061.1 1174352..1174543(+) (comZ) [Bacillus velezensis strain LBUM279]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCAGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794