Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I8N73_RS04490 Genome accession   NZ_CP065791
Coordinates   914303..915094 (+) Length   263 a.a.
NCBI ID   WP_094032655.1    Uniprot ID   -
Organism   Bacillus velezensis strain LBUM279     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 909303..920094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I8N73_RS04465 (I8N73_04465) - 911298..912182 (+) 885 WP_031378902.1 PhzF family phenazine biosynthesis isomerase -
  I8N73_RS04470 (I8N73_04470) - 912259..912843 (+) 585 WP_007408549.1 nitroreductase -
  I8N73_RS04475 (I8N73_04475) - 912882..913073 (-) 192 WP_003155508.1 YfhD family protein -
  I8N73_RS04480 (I8N73_04480) - 913144..913254 (-) 111 WP_003155504.1 YfhE family protein -
  I8N73_RS04485 (I8N73_04485) - 913312..914211 (-) 900 WP_094032654.1 TIGR01777 family oxidoreductase -
  I8N73_RS04490 (I8N73_04490) recX 914303..915094 (+) 792 WP_094032655.1 recombination regulator RecX Regulator
  I8N73_RS04495 (I8N73_04495) - 915101..915415 (+) 315 WP_007408553.1 YfhH family protein -
  I8N73_RS04500 (I8N73_04500) - 915560..916753 (+) 1194 WP_031378905.1 MFS transporter -
  I8N73_RS04505 (I8N73_04505) - 916793..917182 (-) 390 WP_199022433.1 DUF2606 family protein -
  I8N73_RS04510 (I8N73_04510) - 917145..918056 (-) 912 WP_015417062.1 trypsin-like serine peptidase -
  I8N73_RS04515 (I8N73_04515) - 918203..918355 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  I8N73_RS04520 (I8N73_04520) - 918479..918748 (+) 270 WP_003155492.1 YfhJ family protein -
  I8N73_RS04525 (I8N73_04525) - 918875..919402 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  I8N73_RS04530 (I8N73_04530) - 919488..919823 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30986.18 Da        Isoelectric Point: 6.0921

>NTDB_id=514523 I8N73_RS04490 WP_094032655.1 914303..915094(+) (recX) [Bacillus velezensis strain LBUM279]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDIVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=514523 I8N73_RS04490 WP_094032655.1 914303..915094(+) (recX) [Bacillus velezensis strain LBUM279]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATCGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTTTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795