Detailed information NTG0514503

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: I8N72_RS16830
• Genome accession: NZ_CP065790
• Coordinates: 3414041..3415204 (-)
• Length: 387 a.a.
• NCBI ID: WP_015387626.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LBUM1082
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3409041..3420204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I8N72_RS16800 (I8N72_16800)	-	3409306..3409725 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
I8N72_RS16805 (I8N72_16805)	comFC	3409799..3410488 (-)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
I8N72_RS16810 (I8N72_16810)	-	3410494..3410778 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
I8N72_RS16815 (I8N72_16815)	comFA	3410836..3412221 (-)	1386	WP_015387627.1	DEAD/DEAH box helicase	Machinery gene
I8N72_RS16820 (I8N72_16820)	-	3412329..3413177 (-)	849	WP_003151387.1	DegV family protein	-
I8N72_RS16825 (I8N72_16825)	degU	3413275..3413964 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
I8N72_RS16830 (I8N72_16830)	degS	3414041..3415204 (-)	1164	WP_015387626.1	two-component sensor histidine kinase DegS	Regulator
I8N72_RS16835 (I8N72_16835)	-	3415427..3416074 (+)	648	WP_003151384.1	YigZ family protein	-
I8N72_RS16840 (I8N72_16840)	-	3416079..3417293 (+)	1215	WP_015387625.1	LCP family protein	-
I8N72_RS16845 (I8N72_16845)	-	3417383..3418459 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
I8N72_RS16850 (I8N72_16850)	tuaH	3418592..3419788 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44971.80 Da
• Isoelectric Point: 6.8616

>NTDB_id=514503 I8N72_RS16830 WP_015387626.1 3414041..3415204(-) (degS) [Bacillus velezensis strain LBUM1082]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLLERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=514503 I8N72_RS16830 WP_015387626.1 3414041..3415204(-) (degS) [Bacillus velezensis strain LBUM1082]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCTGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946