Detailed information NTG0514383

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KYF39_RS09595
• Genome accession: NZ_CP079205
• Coordinates: 2060277..2063042 (+)
• Length: 921 a.a.
• NCBI ID: WP_004917760.1
• Uniprot ID: E4TE29
• Organism: Riemerella anatipestifer RA-YM
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2055277..2068042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYF39_RS09575 (KYF39_09575)	tsaE	2056227..2056634 (-)	408	WP_004917749.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
KYF39_RS09580 (KYF39_09580)	-	2057111..2057764 (+)	654	WP_004917751.1	hypothetical protein	-
KYF39_RS09585 (KYF39_09585)	-	2057886..2058719 (+)	834	WP_004917755.1	phosphatase PAP2 family protein	-
KYF39_RS09590 (KYF39_09590)	eptA	2058706..2060229 (+)	1524	WP_004917757.1	phosphoethanolamine--lipid A transferase EptA	-
KYF39_RS09595 (KYF39_09595)	uvrA	2060277..2063042 (+)	2766	WP_004917760.1	excinuclease ABC subunit UvrA	Machinery gene
KYF39_RS09600 (KYF39_09600)	-	2063101..2065278 (-)	2178	WP_004917761.1	TonB-dependent siderophore receptor	-
KYF39_RS09605 (KYF39_09605)	kdsA	2065305..2066114 (-)	810	WP_004917762.1	3-deoxy-8-phosphooctulonate synthase	-
KYF39_RS09610 (KYF39_09610)	-	2066263..2066823 (-)	561	WP_004917764.1	RsmD family RNA methyltransferase	-
KYF39_RS09615 (KYF39_09615)	-	2066849..2067565 (-)	717	WP_004917766.1	DUF3822 family protein	-

Sequence

Protein

• Length: 921 a.a.
• Molecular weight: 103381.49 Da
• Isoelectric Point: 6.1758

>NTDB_id=514383 KYF39_RS09595 WP_004917760.1 2060277..2063042(+) (uvrA) [Riemerella anatipestifer RA-YM]
MNIKNNIFVKNAHLNNLKNIDVLIPKNKLVVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGRLEKPKIDDIK
GLAPSIAIQQKVISSNPRSTVGTSTEIYDYLKLLFARVGRTYSPVSGDEVKKDSISDVISYIEENPNQEFLLTAPLSFAD
GDFKSLLNTLKVSGFTRLEINGNIAEIEDLESFGFVPEKEMSLNLVIDRFVYEDDEYFLQRLADSIQTAFYEGHGSCALK
NIETQKIKHFSNLFEADGISFLEPNLHFFSFNNPYGACPTCEGYGKVVGIDEDLVIPNKRLSVYEDAVACWKGETMSEWK
MHFIKNAPDFPIHKPYFELTKEQKQLLWRGTGAKNFPCIDQFFRMLEENLYKIQYRVMLSRYRGKTKCPDCEGLRLRKET
EWVKVGGHNIQSLMELPLDELLPLIKNLKLTKHEQEIAKRLLYEITTRLEFLLKVGLGYLTLNRTSNTLSGGESQRINLA
TSLGSSLVGSIYILDEPSIGLHSQDTENLIEVLKNLRDLGNTVIVVEHDEDIMRAADYIIDIGPEAGFLGGELVFAGDFK
DLKEADTLTSKYLTGRLEIAVPKRRRRAKSFINIKGARQNNLKNIDVDIPLENLVVVTGVSGSGKSTLMKEVLANDIQIQ
LGMGGKKADYDYVEFPPQLVKHIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQRHSKTMNLKPKHFSFNVDGGRCDE
CKGEGIITISMQFMADVELECEHCKGARFKSEILEVKFDEKNIADILQMTVDEAIDFFSDNKQDKIVTKLKPLQEVGLGY
LKLGQSSSTLSGGEAQRVKLASFLVKGVTTEKTLFIFDEPSTGLHFHDIQKLLTSLQALIELGHSVVVIEHQPDIIKSAD
WIIDIGPNAGKYGGEVVFAGTPEDLAKDKKSKTAKFVAEKL

Nucleotide

• Length: 2766 bp

>NTDB_id=514383 KYF39_RS09595 WP_004917760.1 2060277..2063042(+) (uvrA) [Riemerella anatipestifer RA-YM]
ATGAATATTAAAAATAATATTTTTGTTAAAAACGCACATCTTAACAACCTTAAAAATATAGATGTTCTCATACCTAAAAA
CAAACTAGTGGTAGTAACTGGCGTGTCTGGTAGTGGGAAATCGTCTTTAGCCTTTGATACTATTTATGCCGAAGGGCAGA
GGCGTTATGTGGAGAGTTTAAGCTCTTATGCTAGGCAGTTTTTGGGACGATTGGAAAAGCCAAAGATAGACGATATTAAA
GGTTTAGCACCATCTATCGCCATACAACAGAAAGTAATTTCTTCTAATCCAAGGTCCACAGTAGGAACTTCCACCGAAAT
TTACGATTATCTTAAATTATTGTTTGCTCGTGTGGGGCGTACCTATTCACCTGTGTCTGGTGATGAGGTGAAAAAGGACA
GCATTTCTGATGTCATTTCTTATATAGAAGAAAATCCTAATCAAGAGTTTCTACTCACAGCACCGCTTTCTTTTGCTGAT
GGTGATTTTAAATCATTGTTAAATACATTGAAAGTTTCAGGATTTACTAGATTGGAAATTAACGGAAATATCGCTGAAAT
AGAAGATTTAGAGAGTTTCGGCTTCGTTCCTGAAAAAGAGATGTCGCTTAATTTGGTTATTGACCGCTTTGTTTACGAGG
ACGATGAGTATTTTCTGCAACGCTTAGCAGATTCTATCCAAACAGCTTTTTACGAAGGGCACGGCTCTTGTGCTTTAAAA
AATATTGAAACACAAAAAATAAAACATTTTTCTAACCTTTTTGAAGCTGATGGTATTTCTTTTTTAGAACCAAATCTTCA
TTTTTTCAGTTTTAATAATCCTTACGGAGCGTGTCCTACTTGTGAGGGTTATGGTAAAGTGGTTGGGATAGATGAAGACT
TAGTAATTCCTAATAAAAGGCTTTCGGTTTACGAAGATGCCGTCGCTTGTTGGAAAGGAGAAACGATGAGCGAGTGGAAA
ATGCATTTTATCAAAAACGCTCCAGATTTTCCAATCCATAAACCCTATTTTGAACTTACTAAAGAGCAAAAACAACTCTT
ATGGAGAGGAACAGGAGCTAAAAATTTCCCTTGTATAGACCAGTTTTTCCGTATGCTGGAGGAGAATTTGTATAAGATAC
AATACCGAGTGATGCTTTCTCGTTACAGGGGTAAAACCAAATGTCCCGACTGCGAAGGTCTAAGATTAAGAAAAGAAACC
GAATGGGTAAAAGTGGGAGGGCATAACATACAATCGTTAATGGAATTACCATTAGACGAACTTCTGCCTTTAATTAAGAA
TCTTAAACTTACCAAACACGAGCAAGAAATTGCTAAAAGGCTACTCTACGAAATTACTACTAGACTAGAGTTTTTGTTAA
AAGTAGGCTTGGGATATTTAACGTTGAACCGTACTTCTAATACTTTGTCAGGTGGAGAAAGTCAAAGGATTAACTTAGCG
ACTAGCTTGGGGAGTTCTTTGGTTGGGTCTATTTATATTTTGGACGAGCCTTCCATTGGGCTACATTCACAGGATACCGA
GAATTTAATAGAAGTTCTAAAGAATTTAAGAGATTTAGGTAATACCGTTATTGTTGTGGAACACGATGAGGATATTATGC
GTGCCGCAGATTATATTATAGATATAGGTCCAGAAGCCGGTTTCCTTGGGGGAGAGCTGGTCTTCGCAGGCGATTTTAAA
GACCTCAAAGAAGCCGATACTTTAACTTCTAAATACCTTACAGGAAGGCTAGAAATAGCAGTGCCAAAAAGGAGAAGGAG
AGCTAAATCGTTCATCAATATCAAAGGAGCAAGACAAAATAACCTTAAAAATATAGATGTTGATATTCCTTTGGAGAATT
TGGTGGTGGTTACGGGAGTGTCGGGCTCTGGTAAATCTACATTGATGAAAGAGGTTTTGGCTAACGATATTCAAATCCAG
TTAGGAATGGGAGGCAAAAAAGCCGACTACGATTATGTGGAATTTCCGCCTCAACTTGTGAAGCATATAGAGCTGATAGA
TCAAAATCCTATCGGAAAATCGTCTAGGTCTAATCCTGTAACCTATCTTAAGGCTTATGATGATATTAGAGATTTGTTCG
CTAAGCAGCGTCATTCTAAAACTATGAATTTGAAGCCTAAGCACTTTTCGTTTAATGTAGATGGTGGGAGATGTGATGAG
TGTAAAGGTGAGGGTATTATTACCATATCTATGCAGTTTATGGCAGATGTGGAACTAGAGTGTGAGCACTGTAAAGGTGC
AAGATTTAAGTCCGAAATATTGGAAGTTAAATTTGATGAGAAAAACATTGCAGATATTCTACAAATGACGGTAGATGAAG
CGATTGATTTCTTTAGTGATAATAAACAAGATAAAATAGTTACGAAACTAAAACCATTGCAAGAGGTAGGTTTAGGCTAT
CTTAAACTAGGGCAAAGTTCTTCTACGCTTTCGGGTGGGGAAGCTCAAAGGGTAAAGTTGGCTTCATTTTTAGTGAAGGG
CGTAACTACGGAGAAAACGCTTTTCATCTTTGATGAACCTTCCACAGGGCTTCATTTTCACGATATACAGAAATTATTAA
CCTCATTACAGGCACTTATAGAGCTGGGGCATTCTGTAGTAGTTATAGAGCATCAGCCAGATATTATTAAGTCAGCAGAT
TGGATCATAGATATAGGTCCTAACGCAGGTAAGTATGGTGGAGAAGTGGTTTTTGCTGGAACACCTGAGGATTTAGCAAA
AGATAAAAAATCCAAAACTGCTAAATTCGTAGCCGAAAAACTTTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (602-841)

• UvrA interaction domain (UvrA_inter) (135-240)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-356)

3D structure

• AlphaFold DB: E4TE29

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	44.271	100	0.461
uvrA	Streptococcus pneumoniae TIGR4	44.271	100	0.461
uvrA	Streptococcus pneumoniae D39	44.271	100	0.461