Detailed information NTG0514339

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KYF39_RS01335
• Genome accession: NZ_CP079205
• Coordinates: 294196..297021 (-)
• Length: 941 a.a.
• NCBI ID: WP_014411215.1
• Uniprot ID: H8MDC1
• Organism: Riemerella anatipestifer RA-YM
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 289196..302021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYF39_RS01320 (KYF39_01320)	-	291421..291954 (+)	534	WP_004918921.1	hypothetical protein	-
KYF39_RS01325 (KYF39_01325)	purH	292054..293568 (-)	1515	WP_004918920.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
KYF39_RS01330 (KYF39_01330)	-	293588..294172 (-)	585	WP_004918918.1	outer membrane beta-barrel protein	-
KYF39_RS01335 (KYF39_01335)	uvrA	294196..297021 (-)	2826	WP_014411215.1	excinuclease ABC subunit UvrA	Machinery gene
KYF39_RS01340 (KYF39_01340)	-	297145..298089 (-)	945	WP_004918915.1	SPFH domain-containing protein	-
KYF39_RS01345 (KYF39_01345)	rpsA	298420..300201 (+)	1782	WP_004918909.1	30S ribosomal protein S1	-
KYF39_RS01350 (KYF39_01350)	-	300419..301615 (-)	1197	WP_004918907.1	aminopeptidase C	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105469.16 Da
• Isoelectric Point: 7.3407

>NTDB_id=514339 KYF39_RS01335 WP_014411215.1 294196..297021(-) (uvrA) [Riemerella anatipestifer RA-YM]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLNLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNEIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYEKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=514339 KYF39_RS01335 WP_014411215.1 294196..297021(-) (uvrA) [Riemerella anatipestifer RA-YM]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCAGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCGCTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTGCAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGATGGCACTTT
GCAAGATATAGAATACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGGATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGTGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAATGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTATTTGACCTTAACCTACAAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAAACTAAAA
TTAACTTTGAAGGGCTAATCCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAACGA
GAGTTTACAGTAGAAGAAATCTGTACGGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACTCAGATAGGTTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTTATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTGGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCAGGTAAATATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGATACCATTACAGCAGATTACCTCACAGGAAGAAGAAAAATAGAAATTCCCGAAAAGAGAAGAGAAGGCAATGGTAATG
AGATTGTCCTCAAAGGAGCTACGGGCAATAATCTTAAAAATGTAACTCTAAAAATTCCTTTAGGGAAGATGGTTGTAGTT
ACGGGGATTTCGGGAAGTGGAAAATCCTCGCTAATCAACGGAACTCTCTACCCTATTCTTAACCGACATTTCTACCGTGC
TGTGCAAGAGCCTCTACCTTACGAAAAGATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCCA
TCGGTAGAACGCCTCGTTCTAACCCTGCTACTTACACAGGTGTATTTTCGGATATCCGAACCTTGTTCGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGGTTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGTTTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTACATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAGACCTTGGAGGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACTATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
GTCTACTACACTTTCAGGCGGAGAGGCTCAAAGGGTAAAATTGGCTACAGAACTTTCTAAGAAACAAACAGGTAAAACAC
TTTATATCTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTGGGTAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGCATTGTGGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

3D structure

• AlphaFold DB: H8MDC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.695	100	0.519
uvrA	Streptococcus pneumoniae TIGR4	51.695	100	0.519
uvrA	Streptococcus pneumoniae D39	51.695	100	0.519