Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   KWY62_RS06415 Genome accession   NZ_CP079193
Coordinates   1299383..1299865 (+) Length   160 a.a.
NCBI ID   WP_014637825.1    Uniprot ID   -
Organism   Streptococcus suis strain ID41570     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1294383..1304865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWY62_RS06385 (KWY62_06385) - 1294530..1295714 (-) 1185 WP_257571642.1 GntP family permease -
  KWY62_RS06390 (KWY62_06390) - 1295777..1296833 (+) 1057 WP_371872548.1 IS630 family transposase -
  KWY62_RS06395 (KWY62_06395) folK 1296992..1297480 (-) 489 WP_044673819.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  KWY62_RS06400 (KWY62_06400) folB 1297477..1297839 (-) 363 WP_002938086.1 dihydroneopterin aldolase -
  KWY62_RS06405 (KWY62_06405) folP 1297832..1298644 (-) 813 WP_044668768.1 dihydropteroate synthase -
  KWY62_RS06410 (KWY62_06410) folE 1298653..1299216 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  KWY62_RS06415 (KWY62_06415) mutX 1299383..1299865 (+) 483 WP_014637825.1 8-oxo-dGTP diphosphatase Machinery gene
  KWY62_RS06420 (KWY62_06420) - 1299911..1300588 (-) 678 WP_044673817.1 DUF4956 domain-containing protein -
  KWY62_RS06425 (KWY62_06425) - 1300575..1301318 (-) 744 WP_044673815.1 polyphosphate polymerase domain-containing protein -
  KWY62_RS06430 (KWY62_06430) - 1301511..1301813 (+) 303 WP_014637822.1 hypothetical protein -
  KWY62_RS06435 (KWY62_06435) - 1301834..1302100 (-) 267 WP_014637821.1 DUF2087 domain-containing protein -
  KWY62_RS06440 (KWY62_06440) pheT 1302155..1304554 (-) 2400 WP_044680037.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18496.88 Da        Isoelectric Point: 4.5662

>NTDB_id=514299 KWY62_RS06415 WP_014637825.1 1299383..1299865(+) (mutX) [Streptococcus suis strain ID41570]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLTKPTWEGDRHFQEWLLEGKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=514299 KWY62_RS06415 WP_014637825.1 1299383..1299865(+) (mutX) [Streptococcus suis strain ID41570]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCATCAAGGGAAATGGATTGGGGTCGGTGGCAAGCTGGAACCTGGCGAAACACCACAGGCTTGCG
CTATTCGTGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTCATCACCTTTCCAGACTTC
ACACCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCTTACGACCAGGTCTTAACCAAACCAACCTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGGCAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTGGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763