Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STMM8_RS05285 Genome accession   NZ_CP065787
Coordinates   1005088..1005900 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain MM8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1000088..1010900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM8_RS05260 (STMM8_05285) - 1001024..1001410 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  STMM8_RS05265 - 1001502..1002382 (-) 881 Protein_981 GNAT family N-acetyltransferase -
  STMM8_RS05270 (STMM8_05300) yidA 1002590..1003399 (+) 810 WP_011226081.1 sugar-phosphatase -
  STMM8_RS05275 (STMM8_05305) - 1003401..1004615 (+) 1215 WP_004197368.1 aminoacyltransferase -
  STMM8_RS05280 (STMM8_05310) - 1004667..1005028 (-) 362 Protein_984 YbaN family protein -
  STMM8_RS05285 (STMM8_05315) vicX 1005088..1005900 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  STMM8_RS05290 (STMM8_05320) vicK 1005906..1007246 (-) 1341 WP_004197359.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STMM8_RS05295 (STMM8_05325) vicR 1007239..1007946 (-) 708 WP_011226084.1 response regulator YycF Regulator
  STMM8_RS05300 (STMM8_05330) - 1008473..1009240 (+) 768 WP_022096757.1 amino acid ABC transporter ATP-binding protein -
  STMM8_RS05305 (STMM8_05335) - 1009252..1010085 (+) 834 WP_022096756.1 transporter substrate-binding domain-containing protein -
  STMM8_RS05310 (STMM8_05340) - 1010103..1010801 (+) 699 WP_022096755.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=514262 STMM8_RS05285 WP_011681204.1 1005088..1005900(-) (vicX) [Streptococcus thermophilus strain MM8]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=514262 STMM8_RS05285 WP_011681204.1 1005088..1005900(-) (vicX) [Streptococcus thermophilus strain MM8]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774