Detailed information NTG0514235

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KV381_RS32460
• Genome accession: NZ_CP079114
• Coordinates: 7404574..7405596 (-)
• Length: 340 a.a.
• NCBI ID: WP_030076481.1
• Uniprot ID: A0ABW2MCF5
• Organism: Streptomyces sp. WY228
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 7399574..7410596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KV381_RS32435 (KV381_32435)	-	7400460..7402544 (+)	2085	WP_030076471.1	sensor histidine kinase KdpD	-
KV381_RS32440 (KV381_32440)	-	7402550..7402984 (+)	435	WP_030076473.1	roadblock/LC7 domain-containing protein	-
KV381_RS32445 (KV381_32445)	-	7402987..7403358 (+)	372	WP_030076475.1	DUF742 domain-containing protein	-
KV381_RS32450 (KV381_32450)	-	7403336..7403959 (+)	624	WP_030076477.1	ATP/GTP-binding protein	-
KV381_RS32455 (KV381_32455)	-	7403956..7404540 (+)	585	WP_030076479.1	GAF domain-containing protein	-
KV381_RS32460 (KV381_32460)	cytR	7404574..7405596 (-)	1023	WP_030076481.1	LacI family DNA-binding transcriptional regulator	Regulator
KV381_RS32465 (KV381_32465)	-	7405850..7406713 (+)	864	WP_030623180.1	ABC transporter permease	-
KV381_RS32470 (KV381_32470)	-	7406750..7407769 (+)	1020	WP_030623177.1	ABC transporter substrate-binding protein	-
KV381_RS32475 (KV381_32475)	-	7407766..7408596 (+)	831	WP_030623174.1	ABC transporter ATP-binding protein	-
KV381_RS32480 (KV381_32480)	-	7408703..7408885 (-)	183	WP_210764224.1	hypothetical protein	-
KV381_RS32485 (KV381_32485)	-	7409011..7409961 (+)	951	WP_030076491.1	NAD-dependent epimerase/dehydratase family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 35581.80 Da
• Isoelectric Point: 9.1369

>NTDB_id=514235 KV381_RS32460 WP_030076481.1 7404574..7405596(-) (cytR) [Streptomyces sp. WY228]
MTLDAVAREAGVSLATASRALNGTTRVRDDLRGRVRAAADLLGYIPNAHAQALASAEGNRTVGLICHDVGDPYFAGIAGG
VMRAAAEQDLLVMLASTFREPAREIAYVSMLRAQRARAILLIGSGFQDRAWERAMDAELEPYVRAGGRVAVVSRHRSMRV
DTVQPENRAGAAALAASLVALGHREFAVLSGPPELTTVADRLTGFREGLAGAGITLERVVRGAFTREGGHTATRQLLAAG
GPRPTCLFAVTDVMAVGALAALREAGIRVPEDMSLAGFDDIPVVREVSPPLTTVALPLTEMGEQVIALALRTPSGAGRSR
VLRIEGNVVLRGSTGAPPGS

Nucleotide

• Length: 1023 bp

>NTDB_id=514235 KV381_RS32460 WP_030076481.1 7404574..7405596(-) (cytR) [Streptomyces sp. WY228]
GTGACGCTCGACGCGGTGGCGCGCGAGGCGGGCGTCTCGCTGGCCACCGCGTCCCGGGCGCTGAACGGCACCACCCGGGT
CCGCGACGATCTGCGCGGCCGGGTCCGCGCGGCGGCCGATCTGCTCGGCTACATCCCCAACGCCCACGCCCAGGCCCTGG
CGAGCGCCGAGGGGAACCGTACGGTCGGGCTGATCTGCCACGACGTCGGCGATCCCTACTTCGCGGGCATCGCCGGCGGG
GTGATGCGCGCGGCCGCCGAACAGGATCTGCTGGTGATGCTCGCCTCCACCTTCCGCGAACCCGCCCGTGAGATCGCGTA
CGTCTCGATGCTGCGGGCCCAGCGCGCGCGGGCCATCCTGCTGATCGGCTCCGGCTTCCAGGACCGGGCCTGGGAGCGGG
CGATGGACGCGGAGCTGGAGCCGTACGTCCGGGCCGGCGGGCGGGTCGCGGTGGTCAGCCGGCACCGGTCCATGCGGGTG
GACACCGTGCAGCCGGAGAACCGGGCCGGGGCGGCGGCGCTCGCGGCCTCGCTGGTGGCGCTGGGGCACCGGGAGTTCGC
GGTGCTGAGCGGGCCGCCCGAACTGACCACGGTGGCCGACCGGTTGACCGGATTCCGCGAGGGGCTGGCCGGGGCGGGCA
TCACCCTGGAGCGGGTGGTGCGGGGCGCGTTCACCCGGGAGGGCGGGCACACGGCGACACGGCAACTGCTGGCCGCCGGG
GGGCCGCGGCCGACCTGTCTGTTCGCGGTGACCGATGTGATGGCGGTCGGCGCGCTCGCCGCGCTGCGGGAGGCCGGCAT
ACGCGTGCCCGAGGACATGTCGCTCGCGGGCTTCGACGACATCCCCGTCGTACGCGAGGTGTCGCCGCCGCTGACCACGG
TGGCGCTGCCGCTCACCGAGATGGGCGAGCAGGTGATCGCCCTCGCGTTGCGGACACCGTCGGGAGCGGGGCGCTCCCGG
GTGCTGCGGATCGAGGGGAACGTGGTCCTGCGGGGCAGCACCGGTGCGCCGCCCGGGAGTTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-334)

• Bacterial regulatory proteins, lacI family (LacI) (2-47)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.735	100	0.365