Detailed information NTG0514003

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KW063_RS21860
• Genome accession: NZ_CP078137
• Coordinates: 4389905..4390888 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain Sx181-0-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4384905..4395888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KW063_RS21845 (KW063_21845)	dppA	4386205..4387812 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KW063_RS21850 (KW063_21850)	dppB	4387963..4388982 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KW063_RS21855 (KW063_21855)	dppC	4388992..4389894 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KW063_RS21860 (KW063_21860)	amiE	4389905..4390888 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
KW063_RS21865 (KW063_21865)	dppF	4390885..4391889 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KW063_RS21870 (KW063_21870)	yhjV	4391919..4393190 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
KW063_RS21875 (KW063_21875)	-	4393666..4393773 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KW063_RS21880 (KW063_21880)	-	4394149..4394256 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KW063_RS21885 (KW063_21885)	-	4394632..4394739 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=514003 KW063_RS21860 WP_001196496.1 4389905..4390888(+) (amiE) [Escherichia coli strain Sx181-0-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=514003 KW063_RS21860 WP_001196496.1 4389905..4390888(+) (amiE) [Escherichia coli strain Sx181-0-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401