Detailed information NTG0513940

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G32_RS10020
• Genome accession: NZ_CP065750
• Coordinates: 2185760..2187028 (-)
• Length: 422 a.a.
• NCBI ID: WP_041772016.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain FDAARGOS_875
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2180760..2192028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G32_RS10005 (I6G32_10005)	rpoH	2183110..2183964 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
I6G32_RS10010 (I6G32_10010)	ftsX	2184076..2185095 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
I6G32_RS10015 (I6G32_10015)	ftsE	2185095..2185763 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
I6G32_RS10020 (I6G32_10020)	pilA	2185760..2187028 (-)	1269	WP_041772016.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G32_RS10025 (I6G32_10025)	-	2187256..2188608 (+)	1353	WP_013984341.1	M16 family metallopeptidase	-
I6G32_RS10030 (I6G32_10030)	-	2188601..2190142 (+)	1542	WP_013984342.1	M16 family metallopeptidase	-
I6G32_RS10035 (I6G32_10035)	rsmD	2190142..2190744 (+)	603	WP_013984343.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G32_RS10040 (I6G32_10040)	-	2190756..2191160 (-)	405	WP_013984344.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 45004.26 Da
• Isoelectric Point: 4.6931

>NTDB_id=513940 I6G32_RS10020 WP_041772016.1 2185760..2187028(-) (pilA) [Stutzerimonas stutzeri strain FDAARGOS_875]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIE
SPLPEPVPEPEPEPEPEPLSAPVVAATPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTA
DVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKLAKKL
QLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEEL
KKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGI
DDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1269 bp

>NTDB_id=513940 I6G32_RS10020 WP_041772016.1 2185760..2187028(-) (pilA) [Stutzerimonas stutzeri strain FDAARGOS_875]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGAGCCTGTACCCGAACCCGAACCCGAACCCGAACCCGAGCCGTTATCTGCCCCGGTCGTTGCGGCCAC
GCCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATAGGCGAAG
GCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTGACCGCC
GACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGG
CGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGTCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCGGCA
AGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTG
CAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGTGTGGGG
CGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCG
CCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGACTGCACACCAAGGACAACCTGATGGAAGAGCTG
AAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGCACCGG
ACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCA
CCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGCATC
GACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.761	99.052	0.493