Detailed information NTG0513911

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G47_RS15285
• Genome accession: NZ_CP065748
• Coordinates: 3275360..3276580 (+)
• Length: 406 a.a.
• NCBI ID: WP_016454145.1
• Uniprot ID: A0A7T2YY92
• Organism: Delftia lacustris strain FDAARGOS_890
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3270360..3281580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G47_RS15265 (I6G47_15265)	coaD	3271130..3271630 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
I6G47_RS15270 (I6G47_15270)	rsmD	3271761..3272468 (-)	708	WP_016454148.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G47_RS15275 (I6G47_15275)	-	3272465..3273826 (-)	1362	WP_016454147.1	M16 family metallopeptidase	-
I6G47_RS15280 (I6G47_15280)	-	3273853..3275331 (-)	1479	WP_016449075.1	M16 family metallopeptidase	-
I6G47_RS15285 (I6G47_15285)	pilA	3275360..3276580 (+)	1221	WP_016454145.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G47_RS15290 (I6G47_15290)	-	3277513..3278250 (+)	738	WP_223275154.1	GntR family transcriptional regulator	-
I6G47_RS15295 (I6G47_15295)	-	3278595..3279722 (+)	1128	WP_016454143.1	hypothetical protein	-
I6G47_RS15300 (I6G47_15300)	-	3279733..3280704 (+)	972	WP_016454142.1	hypothetical protein	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42489.36 Da
• Isoelectric Point: 5.5295

>NTDB_id=513911 I6G47_RS15285 WP_016454145.1 3275360..3276580(+) (pilA) [Delftia lacustris strain FDAARGOS_890]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGNSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTELRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=513911 I6G47_RS15285 WP_016454145.1 3275360..3276580(+) (pilA) [Delftia lacustris strain FDAARGOS_890]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACACCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAACAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGAACTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCTGCAGCCGTCAAGGCCCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

3D structure

• AlphaFold DB: A0A7T2YY92

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.991	100	0.5