Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   I6G54_RS25260 Genome accession   NZ_CP065743
Coordinates   4699288..4699746 (+) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus tropicus strain FDAARGOS_897     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4694288..4704746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G54_RS25245 (I6G54_25245) - 4694947..4695183 (+) 237 WP_000283743.1 hypothetical protein -
  I6G54_RS25250 (I6G54_25250) - 4695358..4697466 (-) 2109 WP_002194038.1 polyphosphate kinase -
  I6G54_RS25255 (I6G54_25255) - 4697575..4699110 (-) 1536 WP_033691460.1 Ppx/GppA family phosphatase -
  I6G54_RS25260 (I6G54_25260) kre 4699288..4699746 (+) 459 WP_000804871.1 YkyB family protein Regulator
  I6G54_RS25265 (I6G54_25265) - 4699778..4700440 (-) 663 WP_002194040.1 YkyA family protein -
  I6G54_RS25270 (I6G54_25270) - 4701095..4701736 (-) 642 WP_002194042.1 diguanylate cyclase domain-containing protein -
  I6G54_RS25275 (I6G54_25275) - 4701901..4702134 (+) 234 WP_033691462.1 SPP1 phage holin family protein -
  I6G54_RS25280 (I6G54_25280) - 4702166..4702666 (-) 501 WP_002194043.1 hypothetical protein -
  I6G54_RS25285 (I6G54_25285) - 4703086..4704633 (+) 1548 WP_038356973.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=513847 I6G54_RS25260 WP_000804871.1 4699288..4699746(+) (kre) [Bacillus tropicus strain FDAARGOS_897]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=513847 I6G54_RS25260 WP_000804871.1 4699288..4699746(+) (kre) [Bacillus tropicus strain FDAARGOS_897]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5