Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | I6G54_RS06375 | Genome accession | NZ_CP065743 |
| Coordinates | 984723..987158 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971179.1 | Uniprot ID | A0A063CE58 |
| Organism | Bacillus tropicus strain FDAARGOS_897 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 979723..992158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G54_RS06360 (I6G54_06360) | ctsR | 982448..982909 (+) | 462 | WP_001244563.1 | transcriptional regulator CtsR | - |
| I6G54_RS06365 (I6G54_06365) | - | 983083..983631 (+) | 549 | WP_001979504.1 | UvrB/UvrC motif-containing protein | - |
| I6G54_RS06370 (I6G54_06370) | - | 983636..984700 (+) | 1065 | WP_000050825.1 | protein arginine kinase | - |
| I6G54_RS06375 (I6G54_06375) | clpC | 984723..987158 (+) | 2436 | WP_000971179.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| I6G54_RS06380 (I6G54_06380) | radA | 987255..988631 (+) | 1377 | WP_001085212.1 | DNA repair protein RadA | Machinery gene |
| I6G54_RS06385 (I6G54_06385) | disA | 988635..989708 (+) | 1074 | WP_000392168.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| I6G54_RS06390 (I6G54_06390) | - | 989869..990978 (+) | 1110 | WP_000919684.1 | PIN/TRAM domain-containing protein | - |
| I6G54_RS06395 (I6G54_06395) | ispD | 990995..991675 (+) | 681 | WP_000288291.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90530.34 Da Isoelectric Point: 6.4056
>NTDB_id=513821 I6G54_RS06375 WP_000971179.1 984723..987158(+) (clpC) [Bacillus tropicus strain FDAARGOS_897]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=513821 I6G54_RS06375 WP_000971179.1 984723..987158(+) (clpC) [Bacillus tropicus strain FDAARGOS_897]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCGATTCGTATTGGGCATAA
CAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTTG
GATTAAGTCCAGAGAAGGTTCAAAAAGAAGTAGAAGCGTTAATCGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCCCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGCGAAGGTGAAGGGGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCTTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCATCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTTGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGGGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCCGGAACGAAATACCGTGGTGAATTTGAAGACCGTTTGAAGAAAGTAATGGA
TGAAATCCGCCAAGCAGGAAATATCATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGACGCATCGAACATTTTAAAACCATCTTTAGCTCGTGGGGAATTACAATGTATTGGGGCGACAACGTTAGATGAA
TACCGCAAATACATTGAAAAAGATGCAGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGATGA
ATCAACTCAAATTTTAAAAGGTTTACGCGATCGTTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAGTTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTT
GTTTCTACGTGGACTCGTATCCCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGCCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGCTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACGGAGTTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGCTT
AGTGGGATCTCCTCCGGGGTATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAAGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGAGGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCGGCTATTGCTGATAAAGGGTTTGACCGTGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCGATTCGTATTGGGCATAA
CAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTTG
GATTAAGTCCAGAGAAGGTTCAAAAAGAAGTAGAAGCGTTAATCGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCCCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGCGAAGGTGAAGGGGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCTTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCATCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTTGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGGGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCCGGAACGAAATACCGTGGTGAATTTGAAGACCGTTTGAAGAAAGTAATGGA
TGAAATCCGCCAAGCAGGAAATATCATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGACGCATCGAACATTTTAAAACCATCTTTAGCTCGTGGGGAATTACAATGTATTGGGGCGACAACGTTAGATGAA
TACCGCAAATACATTGAAAAAGATGCAGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGATGA
ATCAACTCAAATTTTAAAAGGTTTACGCGATCGTTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAGTTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTT
GTTTCTACGTGGACTCGTATCCCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGCCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGCTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACGGAGTTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGCTT
AGTGGGATCTCCTCCGGGGTATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAAGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGAGGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCGGCTATTGCTGATAAAGGGTTTGACCGTGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.705 |
79.778 |
0.42 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |