Detailed information NTG0513812

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: I6G54_RS04390
• Genome accession: NZ_CP065743
• Coordinates: 576607..577971 (-)
• Length: 454 a.a.
• NCBI ID: WP_001975268.1
• Uniprot ID: -
• Organism: Bacillus tropicus strain FDAARGOS_897
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 571607..582971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G54_RS04370 (I6G54_04370)	secA	571951..574458 (-)	2508	WP_001975256.1	preprotein translocase subunit SecA	-
I6G54_RS04375 (I6G54_04375)	hpf	574732..575274 (-)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
I6G54_RS04380 (I6G54_04380)	cspC	575598..575795 (-)	198	WP_001990088.1	cold shock protein CspC	-
I6G54_RS04385 (I6G54_04385)	-	575922..576626 (-)	705	WP_001975266.1	ComF family protein	-
I6G54_RS04390 (I6G54_04390)	comFA	576607..577971 (-)	1365	WP_001975268.1	ATP-dependent helicase ComFA	Machinery gene
I6G54_RS04395 (I6G54_04395)	-	578099..579502 (-)	1404	WP_033692367.1	NlpC/P60 family protein	-
I6G54_RS04400 (I6G54_04400)	-	579649..579963 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
I6G54_RS04405 (I6G54_04405)	-	580137..580979 (-)	843	WP_000844763.1	DegV family protein	-
I6G54_RS04410 (I6G54_04410)	-	581219..581854 (+)	636	WP_000926682.1	YigZ family protein	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51696.33 Da
• Isoelectric Point: 9.2773

>NTDB_id=513812 I6G54_RS04390 WP_001975268.1 576607..577971(-) (comFA) [Bacillus tropicus strain FDAARGOS_897]
MFAGKQLLLEEISSDLRRELSDLKEKGEIVCVQGVIKRDSKYICQRCGNIEQRLFASFLCKRCGKACMYCRNCITMGRVS
ECTVLVRGIHERKGERELNSLQWEGALATGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVMELAPRLQEVFPSINVAALYGGSVDHEKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEDVSLLLKGLDNRIDGVHAEDPMRKEKVTSFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEVFSESALV
QIAGRAGRSFEEPCGEVMYFHYGKTEAMVRAKKHIQSMNKSAKEQGLINVLFTL

Nucleotide

• Length: 1365 bp

>NTDB_id=513812 I6G54_RS04390 WP_001975268.1 576607..577971(-) (comFA) [Bacillus tropicus strain FDAARGOS_897]
ATGTTTGCTGGGAAACAGTTGCTATTAGAAGAAATATCTTCAGACTTAAGGAGAGAATTAAGTGATTTAAAAGAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAATAAAGAGGGATTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGAC
TATTTGCATCATTTTTATGTAAAAGATGCGGTAAAGCATGCATGTATTGCCGGAATTGTATAACGATGGGGAGAGTTAGT
GAATGTACTGTACTTGTTCGAGGGATTCATGAAAGAAAAGGAGAAAGGGAATTAAATTCGTTACAGTGGGAAGGTGCATT
GGCTACTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GTGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGAACGGACGTTGTAATGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCGATG
AAAGAGAAGGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCGGGAAGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTATTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGATGTGAGTCTGTTATTGAAAGGATTGGATAATCGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGACATCCTTCAGAAAGGGAGACATTCCGCTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCGGAAGAAGAAGTTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTGTGGCGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
GATGGTACGTGCGAAAAAACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTGATTAATGTATTGTTTACTT
TGTGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (107-254)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.922	95.595	0.487
comFA	Latilactobacillus sakei subsp. sakei 23K	41.235	89.207	0.368