Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I6G77_RS25875 Genome accession   NZ_CP065739
Coordinates   5032184..5032360 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain FDAARGOS_920     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 5027184..5037360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G77_RS25855 (I6G77_25855) - 5029700..5030008 (-) 309 WP_042515571.1 hypothetical protein -
  I6G77_RS25860 (I6G77_25860) - 5030155..5030337 (-) 183 WP_001211116.1 YjzD family protein -
  I6G77_RS25865 (I6G77_25865) - 5030494..5031228 (+) 735 WP_000028705.1 hypothetical protein -
  I6G77_RS25870 (I6G77_25870) - 5031258..5032130 (+) 873 WP_042515570.1 NAD-dependent epimerase/dehydratase family protein -
  I6G77_RS25875 (I6G77_25875) comZ 5032184..5032360 (+) 177 WP_009879752.1 ComZ family protein Regulator
  I6G77_RS25880 (I6G77_25880) fabH 5032746..5033678 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  I6G77_RS25885 (I6G77_25885) fabF 5033710..5034948 (+) 1239 WP_002194671.1 beta-ketoacyl-ACP synthase II -
  I6G77_RS25890 (I6G77_25890) - 5035055..5035843 (+) 789 WP_002194672.1 DUF2268 domain-containing protein -
  I6G77_RS25895 (I6G77_25895) - 5035987..5036733 (+) 747 WP_000966137.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=513801 I6G77_RS25875 WP_009879752.1 5032184..5032360(+) (comZ) [Bacillus tropicus strain FDAARGOS_920]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=513801 I6G77_RS25875 WP_009879752.1 5032184..5032360(+) (comZ) [Bacillus tropicus strain FDAARGOS_920]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAGCCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586