Detailed information NTG0513788

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6G77_RS19840
• Genome accession: NZ_CP065739
• Coordinates: 3846459..3847586 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus tropicus strain FDAARGOS_920
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3841459..3852586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G77_RS19810 (I6G77_19810)	spoIIIJ	3841504..3842271 (-)	768	WP_000727747.1	YidC family membrane integrase SpoIIIJ	-
I6G77_RS19815 (I6G77_19815)	rnpA	3842324..3842671 (-)	348	WP_000726630.1	ribonuclease P protein component	-
I6G77_RS19820 (I6G77_19820)	rpmH	3842748..3842882 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
I6G77_RS19825 (I6G77_19825)	dnaA	3843448..3844788 (+)	1341	WP_000428025.1	chromosomal replication initiator protein DnaA	-
I6G77_RS19830 (I6G77_19830)	dnaN	3844967..3846106 (+)	1140	WP_001212891.1	DNA polymerase III subunit beta	-
I6G77_RS19835 (I6G77_19835)	yaaA	3846234..3846446 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
I6G77_RS19840 (I6G77_19840)	recF	3846459..3847586 (+)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
I6G77_RS19845 (I6G77_19845)	gyrB	3847625..3849547 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
I6G77_RS19850 (I6G77_19850)	gyrA	3849636..3852107 (+)	2472	WP_001282851.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=513788 I6G77_RS19840 WP_000470750.1 3846459..3847586(+) (recF) [Bacillus tropicus strain FDAARGOS_920]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=513788 I6G77_RS19840 WP_000470750.1 3846459..3847586(+) (recF) [Bacillus tropicus strain FDAARGOS_920]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAGTTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGGAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCTAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTAATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTACGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTGGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTATTAGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651