Detailed information NTG0051371

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: N564_RS05670
• Genome accession: NC_022352
• Coordinates: 1084323..1085282 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni subsp. jejuni 00-2426
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1079323..1090282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N564_RS05645 (N564_01108)	neuC	1079888..1081003 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
N564_RS09375	-	1081000..1081914 (+)	915	Protein_1091	beta-1,4-N-acetylgalactosaminyltransferase	-
N564_RS09380	-	1081948..1082610 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
N564_RS05660 (N564_01110)	-	1082605..1083456 (-)	852	WP_014516804.1	glycosyltransferase	-
N564_RS05665 (N564_01111)	waaV	1083440..1084264 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
N564_RS05670 (N564_01112)	waaF	1084323..1085282 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
N564_RS05675 (N564_01113)	gmhA	1085263..1085823 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
N564_RS05680 (N564_01114)	rfaE1	1085820..1087205 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
N564_RS05685 (N564_01115)	rfaD	1087198..1088151 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
N564_RS05690 (N564_01116)	gmhB	1088152..1088712 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
N564_RS05695 (N564_01117)	-	1088794..1089096 (+)	303	WP_002852762.1	cytochrome c	-
N564_RS05700 (N564_01118)	ccoS	1089119..1089325 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=51371 N564_RS05670 WP_002875425.1 1084323..1085282(+) (waaF) [Campylobacter jejuni subsp. jejuni 00-2426]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=51371 N564_RS05670 WP_002875425.1 1084323..1085282(+) (waaF) [Campylobacter jejuni subsp. jejuni 00-2426]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1