Detailed information NTG0513656

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: I6G23_RS03250
• Genome accession: NZ_CP065735
• Coordinates: 367354..368382 (+)
• Length: 342 a.a.
• NCBI ID: WP_010906347.1
• Uniprot ID: A0AAP4JQE3
• Organism: Lactococcus lactis strain FDAARGOS_866
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 362354..373382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G23_RS03225 (I6G23_03225)	-	362900..363394 (-)	495	WP_010906351.1	RNA polymerase sigma factor	-
I6G23_RS03230 (I6G23_03230)	lmrP	363582..364808 (+)	1227	WP_010906350.1	multidrug efflux MFS transporter LmrP	-
I6G23_RS03235 (I6G23_03235)	-	364892..366112 (+)	1221	WP_003132654.1	MDR family MFS transporter	-
I6G23_RS03240 (I6G23_03240)	rsmD	366283..366822 (+)	540	WP_015427191.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G23_RS03245 (I6G23_03245)	coaD	366870..367367 (+)	498	WP_010906348.1	pantetheine-phosphate adenylyltransferase	-
I6G23_RS03250 (I6G23_03250)	sepM	367354..368382 (+)	1029	WP_010906347.1	SepM family pheromone-processing serine protease	Regulator
I6G23_RS03255 (I6G23_03255)	-	368503..369360 (+)	858	WP_010906346.1	transcriptional regulator	-
I6G23_RS03260 (I6G23_03260)	-	369463..371586 (+)	2124	WP_010906345.1	radical SAM protein	-
I6G23_RS03265 (I6G23_03265)	-	371579..372406 (+)	828	WP_010906344.1	radical SAM protein	-
I6G23_RS03270 (I6G23_03270)	-	372403..372612 (+)	210	WP_003132661.1	hypothetical protein	-
I6G23_RS03275 (I6G23_03275)	-	372599..373126 (+)	528	WP_153984549.1	nitroreductase family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37379.98 Da
• Isoelectric Point: 9.9183

>NTDB_id=513656 I6G23_RS03250 WP_010906347.1 367354..368382(+) (sepM) [Lactococcus lactis strain FDAARGOS_866]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSIGGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKTAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1029 bp

>NTDB_id=513656 I6G23_RS03250 WP_010906347.1 367354..368382(+) (sepM) [Lactococcus lactis strain FDAARGOS_866]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACGAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGGAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCGGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGTCGCGAAATTGCTGGAACTGG
AACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTAGTGCCTGACTCAGGCACCAAAAAGGAAAGCAGCAACAATTACCTTGGAGCCAAAACCGCAGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (134-194)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (227-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.696	100	0.491