Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I6G28_RS03715 Genome accession   NZ_CP065726
Coordinates   757835..758296 (-) Length   153 a.a.
NCBI ID   WP_003674699.1    Uniprot ID   A0A7T3EV00
Organism   Neisseria cinerea strain FDAARGOS_871     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 752835..763296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G28_RS03690 (I6G28_03690) - 753413..754969 (+) 1557 WP_003674714.1 TerC family protein -
  I6G28_RS03695 (I6G28_03695) surE 754983..755729 (+) 747 WP_111727176.1 5'/3'-nucleotidase SurE -
  I6G28_RS03700 (I6G28_03700) - 755832..756845 (+) 1014 WP_111727657.1 peptidoglycan DD-metalloendopeptidase family protein -
  I6G28_RS03705 (I6G28_03705) - 756965..757447 (-) 483 WP_003674703.1 acyl-CoA thioesterase -
  I6G28_RS03710 (I6G28_03710) - 757600..757761 (-) 162 WP_003674702.1 hypothetical protein -
  I6G28_RS03715 (I6G28_03715) recX 757835..758296 (-) 462 WP_003674699.1 recombination regulator RecX Regulator
  I6G28_RS03720 (I6G28_03720) - 758368..759075 (-) 708 WP_111727175.1 phosphoglycolate phosphatase -
  I6G28_RS03725 (I6G28_03725) - 759472..760737 (+) 1266 WP_111727655.1 Glu/Leu/Phe/Val family dehydrogenase -
  I6G28_RS03730 (I6G28_03730) - 760797..761603 (-) 807 WP_111727174.1 DUF4198 domain-containing protein -
  I6G28_RS03735 (I6G28_03735) - 761793..762002 (+) 210 WP_111727173.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17821.16 Da        Isoelectric Point: 9.7036

>NTDB_id=513575 I6G28_RS03715 WP_003674699.1 757835..758296(-) (recX) [Neisseria cinerea strain FDAARGOS_871]
MKAQKSLRARAMDILSRQEVSRLGLKRKLAPHAESEEELENVLNEFSERNWQSDLRYAEAYIHSKSRKHGSLRLKQALAQ
QGIDEETSRKLLPDRLSEKQTAMDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=513575 I6G28_RS03715 WP_003674699.1 757835..758296(-) (recX) [Neisseria cinerea strain FDAARGOS_871]
ATGAAAGCGCAAAAATCACTCCGAGCCCGAGCGATGGACATCCTGTCCCGTCAGGAAGTCAGCCGTCTCGGGCTGAAGCG
CAAGCTCGCTCCCCATGCCGAAAGCGAAGAAGAGTTGGAAAACGTCTTGAACGAATTTTCCGAACGCAACTGGCAGTCGG
ATTTACGCTATGCAGAAGCCTATATCCACAGCAAAAGCCGTAAACACGGCTCCCTGCGCCTGAAACAGGCCCTGGCTCAA
CAGGGCATAGACGAAGAGACAAGCCGAAAGCTGCTTCCGGACAGGTTGAGCGAAAAACAGACCGCCATGGACGTGTTGCG
TAAAAAATTCAAACATCCGGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACATGCCTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3EV00

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

90.196

100

0.902