Detailed information NTG0513574

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KWZ00_RS00690
• Genome accession: NZ_CP078115
• Coordinates: 122438..125011 (-)
• Length: 857 a.a.
• NCBI ID: WP_047918711.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain O1G1370
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 117438..130011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KWZ00_RS00665 (KWZ00_00665)	-	117472..118182 (-)	711	WP_003690977.1	phosphoglycolate phosphatase	-
KWZ00_RS00670 (KWZ00_00670)	-	118577..119796 (+)	1220	Protein_131	Glu/Leu/Phe/Val dehydrogenase	-
KWZ00_RS00675 (KWZ00_00675)	-	119856..120662 (-)	807	WP_003690982.1	DUF4198 domain-containing protein	-
KWZ00_RS00680 (KWZ00_00680)	-	120854..121063 (+)	210	WP_003688192.1	4-oxalocrotonate tautomerase family protein	-
KWZ00_RS00685 (KWZ00_00685)	-	121152..122366 (+)	1215	WP_033910216.1	pyridoxal phosphate-dependent aminotransferase	-
KWZ00_RS00690 (KWZ00_00690)	clpC	122438..125011 (-)	2574	WP_047918711.1	ATP-dependent chaperone ClpB	Regulator
KWZ00_RS00695 (KWZ00_00695)	trpS	125271..126281 (+)	1011	WP_003690986.1	tryptophan--tRNA ligase	-
KWZ00_RS00700 (KWZ00_00700)	-	126362..126907 (+)	546	WP_003690987.1	hypothetical protein	-
KWZ00_RS00705 (KWZ00_00705)	-	127224..127559 (+)	336	WP_003706381.1	hypothetical protein	-
KWZ00_RS00710 (KWZ00_00710)	ppx	127769..129277 (-)	1509	WP_003693399.1	exopolyphosphatase	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 94805.14 Da
• Isoelectric Point: 5.1970

>NTDB_id=513574 KWZ00_RS00690 WP_047918711.1 122438..125011(-) (clpC) [Neisseria gonorrhoeae strain O1G1370]
MRYDKLTAKFQQALAEAQSLALVADSSYLEAGFVLKALLDDQNSGAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGE
ILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDVVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
IKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMD
DIKVKIEQAKRQGDFARASELEYGELPKLGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDK
LLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEYM
EKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS
NIGSQHIQQMGTQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSDAA
LDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIKVEADGDRLKFA

Nucleotide

• Length: 2574 bp

>NTDB_id=513574 KWZ00_RS00690 WP_047918711.1 122438..125011(-) (clpC) [Neisseria gonorrhoeae strain O1G1370]
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGTTGCGGACAGCAG
CTATCTGGAAGCAGGTTTCGTACTGAAAGCCCTGCTTGACGACCAAAACAGCGGAGCTGCCGCGCTCTTGGCTCATGCGG
GCGTGAACGTGCCGCAGGTTAAACAGCGTTTGCAGCAGCATTTGAACAGCCTGCCGAAAGTGTCCGGACAAGGTGGTGAG
ATTCTGCCCAGCCGCGAATTGCAGGCGGTGTTGAACCTGATGGACAAAGCGGCAACCAAACGCGGCGATGCCTATATCGC
CAGCGAACTTTTCCTGCTCGCCTTGGTGCAGCAGAACGATGCGGCCGGCAAAATCTTGAAAGAAGCCGGTGCGACCGAAC
AAAACATCAATGCCGCGATCGATGTGGTACGAGGCGGACAAAACGTGAACGATGCGAATGCCGAAGACCAACGCGATGCT
TTGAAAAAATACACGCTCGATCTGACCCAACGCGCCCGAGACGGTAAGCTCGACCCCGTTATCGGTCGTGATGATGAAAT
CCGCCGCGCGATTCAGGTGCTGCAACGCCGCACCAAAAACAACCCCGTGCTGATTGGCGAACCCGGTGTGGGTAAAACCG
CCATCGTCGAAGGTTTGGCGCAACGCATCGTCAACGGCGAAGTACCTGAATCCCTGCGTAACAAACGCCTGCTGGTTTTG
GATTTGGCGGCTTTGATTGCCGGTGCGAAATACCGTGGCGAATTTGAAGAACGCTTGAAAGGCGTATTGAACGATTTGGC
GAAAGACGACGGCAACACCCTGATTTTCATCGATGAAATCCATACTTTGGTCGGCGCGGGCAAAACCGACGGCGCGATGG
ACGCGGGCAATATGTTGAAACCGGCCTTGGCGCGGGGCGAACTGCACTGTATCGGTGCGACTACTTTGGACGAATACCGC
CAATACATCGAAAAAGACGCGGCACTCGAACGCCGTTTCCAAAAAGTATTGGTCGGCGAACCCAGCGTGGAAGACACCAT
CGCTATCCTGCGCGGTTTGCAGGAACGTTACGAAATCCACCACGGCATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATTACCGACCGCTTTTTGCCCGACAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGC
ATCAAAATGGAGCTGGACAGCAAACCCGAACAGATGGACAAACTCGACCGCCGCATCATCCAGCTCAAAATGGAAAAAAT
GCACGTTGCCAAAGAAAGCGATGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAAGAAATCGACGGCCTGCAAAAAG
AATACGCCGATTTGGACGAAATCTGGAAAGCCGAAAAAGCCGCGTCTTCCAGCACTGCCGACATCAAGAAACAAATGGAC
GACATCAAAGTCAAAATCGAACAAGCCAAACGTCAAGGCGACTTCGCCCGCGCGTCCGAACTCGAATACGGCGAGTTGCC
GAAATTGGGCGCACAGTTGCAGGCAGCGGAAAGCAACCCCGACGGCAAAAAACAAAACAAACTTTTCCGTACCGAAGTCG
GCGCGGATGAAGTGGCCGAAATCGTTTCCCGTATGACCGGCATTCCCGTATCCAAAATGATGGAAGGCGAACGCGATAAA
TTGTTGAAAATGGAAGAAGTGTTGCACCGCCGCGTAGTCGGTCAAAACGAAGCCGTGCGCGCCGTGTCCGATGCCATCCG
CCGCAGCCGCTCCGGCCTTGCCGATCCGAACAAACCTTACGGCAGCTTCCTGTTCTTAGGCCCGACCGGTGTGGGTAAGA
CCGAGTTGTGCAAAGCTTTGGCAGGCTTCCTGTTCGACAGCGAAGACCACCTCATCCGCATCGACATGTCCGAATACATG
GAAAAACACGCCGTTGCCCGCTTAATCGGCGCGCCTCCGGGTTATGTCGGATACGAAGAGGGCGGCTACCTGACCGAACA
AGTCCGCCGCAAACCGTACAGCGTGATTCTTTTGGACGAAGTGGAAAAAGCCCATCCCGACGTATTCAACATCCTGCTGC
AAGTATTGGATGACGGTCGTTTGACCGACGGACAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATGACTTCC
AACATCGGCAGCCAGCACATCCAACAAATGGGCACGCAGGACTACGAAGCGGTGAAAGAAGTTGTGATGGAGGATGTGAA
AGAACATTTCCGTCCGGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCATGGCTTGGATCAGGCCAATATCCGCA
GTATTGCGAAAATCCAGCTCAAAGGTTTGGAAAAACGTTTGGAAAAACAAAACCTGCGCCTGACTGTTTCCGATGCCGCT
CTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCGATCCAATCGGAAATCGA
AAACCCGCTGGCCAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAAAGTAGAAGCCGACGGCGACAGAC
TGAAATTTGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (767-847)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (96-145)

• AAA domain (Cdc48 subfamily) (AAA_2) (599-761)

• AAA lid domain (AAA_lid_9) (342-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (203-336)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	43.837	100	0.44
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	38.186	100	0.398