Detailed information NTG0513505

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G33_RS13465
• Genome accession: NZ_CP065721
• Coordinates: 2815366..2816664 (-)
• Length: 432 a.a.
• NCBI ID: WP_102829106.1
• Uniprot ID: -
• Organism: Stutzerimonas degradans strain FDAARGOS_876
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2810366..2821664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G33_RS13450 (I6G33_13450)	rpoH	2812719..2813573 (-)	855	WP_008568531.1	RNA polymerase sigma factor RpoH	-
I6G33_RS13455 (I6G33_13455)	ftsX	2813685..2814701 (-)	1017	WP_008568532.1	permease-like cell division protein FtsX	-
I6G33_RS13460 (I6G33_13460)	ftsE	2814701..2815369 (-)	669	WP_008568533.1	cell division ATP-binding protein FtsE	-
I6G33_RS13465 (I6G33_13465)	pilA	2815366..2816664 (-)	1299	WP_102829106.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G33_RS13470 (I6G33_13470)	-	2816876..2818228 (+)	1353	WP_102829107.1	pitrilysin family protein	-
I6G33_RS13475 (I6G33_13475)	-	2818221..2819732 (+)	1512	WP_102829108.1	pitrilysin family protein	-
I6G33_RS13480 (I6G33_13480)	rsmD	2819732..2820325 (+)	594	WP_102829109.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G33_RS13485 (I6G33_13485)	-	2820366..2820770 (-)	405	WP_102829110.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 45992.23 Da
• Isoelectric Point: 4.6197

>NTDB_id=513505 I6G33_RS13465 WP_102829106.1 2815366..2816664(-) (pilA) [Stutzerimonas degradans strain FDAARGOS_876]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQAPAAEPPASEPPEDSQPLAEHADIQAAETAEALAAQSERTAEPEQPIASPA
PVLAEPVPEEPQLEIEPEVEPPLEAQPEPQPAAAAPASEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLL
EELETRLLTADVGVEATGVIMQNLTRRVSRKELADSGALYKALQEELASLLQPVEQPLIIDSQARPYVILVVGVNGVGKT
TTIGKLARKLQQEGKKVMLAAGDTFRAAAVEQLQVWGERNNIAVIAQHTGADSASVIFDAVQAAKARGVDVLIADTAGRL
HTKDNLMEELKKVRRVIGKLDETAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTP
IRYIGVGEGIDDLRTFEADAFVRALFGQQDGK

Nucleotide

• Length: 1299 bp

>NTDB_id=513505 I6G33_RS13465 WP_102829106.1 2815366..2816664(-) (pilA) [Stutzerimonas degradans strain FDAARGOS_876]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAGGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAGGCGCCGGCCGCCGAACCGCCCGCCAGTGAGCCGCCGGAAGACAGCCAGCCACTGGCCGAACACGCGGATATCC
AGGCTGCCGAGACGGCCGAGGCGCTGGCCGCACAGTCCGAGCGCACTGCCGAGCCGGAGCAGCCCATTGCCTCCCCAGCA
CCCGTTCTCGCAGAACCCGTTCCTGAAGAGCCCCAGCTAGAAATCGAGCCAGAAGTCGAGCCTCCGCTCGAAGCGCAGCC
CGAACCGCAGCCGGCCGCTGCCGCGCCGGCGTCCGAGGCCCCGGCCAAGCTGGGCTTCTTCGCCCGCCTGCGCCAGGGCC
TGTCGAAGACCAGCGCCAGCATCGGCGAGGGGATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGACCTGCTC
GAAGAGCTGGAAACCCGCCTGCTGACCGCCGACGTCGGCGTCGAAGCCACCGGCGTGATCATGCAGAACCTCACCCGCCG
CGTGTCGCGCAAGGAACTGGCCGACAGCGGTGCGCTGTACAAGGCGCTGCAGGAAGAGCTGGCGAGCCTGCTGCAACCGG
TCGAGCAGCCGCTGATCATCGACAGCCAGGCGCGGCCCTACGTGATTCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACC
ACCACCATCGGCAAGCTGGCGCGCAAGCTGCAGCAGGAGGGCAAGAAGGTCATGCTCGCTGCTGGCGACACCTTCCGCGC
CGCCGCCGTCGAGCAGCTGCAGGTGTGGGGCGAGCGCAACAACATCGCGGTGATCGCCCAGCACACCGGCGCCGATTCGG
CCTCGGTGATCTTCGATGCGGTGCAGGCCGCCAAGGCCCGTGGTGTCGACGTGCTGATCGCCGACACCGCCGGCCGTCTG
CACACCAAGGACAACCTGATGGAGGAGCTCAAGAAGGTCCGTCGGGTGATCGGCAAGCTCGACGAGACGGCGCCGCACGA
GGTGCTACTGGTGCTCGACGCCGGCACCGGACAGAACGCGATCAATCAGACCCGCCAGTTCAATCAGGCGGTCGAGCTCA
CCGGGCTGGCGCTGACCAAGCTCGACGGCACCGCCAAGGGCGGGGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCG
ATCCGCTACATCGGCGTCGGCGAGGGTATCGATGACCTGCGCACCTTCGAGGCGGATGCCTTCGTGCGGGCGCTGTTCGG
CCAGCAGGACGGCAAATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (227-426)

• SRP54-type protein, helical bundle domain (SRP54_N) (142-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.406	97.454	0.481