Detailed information NTG0513453

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G34_RS03680
• Genome accession: NZ_CP065720
• Coordinates: 818179..819453 (-)
• Length: 424 a.a.
• NCBI ID: WP_102838921.1
• Uniprot ID: -
• Organism: Stutzerimonas frequens strain FDAARGOS_877
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 813179..824453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G34_RS03665 (I6G34_03665)	rpoH	815529..816383 (-)	855	WP_003297176.1	RNA polymerase sigma factor RpoH	-
I6G34_RS03670 (I6G34_03670)	ftsX	816495..817514 (-)	1020	WP_102838920.1	permease-like cell division protein FtsX	-
I6G34_RS03675 (I6G34_03675)	ftsE	817511..818182 (-)	672	WP_045665759.1	cell division ATP-binding protein FtsE	-
I6G34_RS03680 (I6G34_03680)	pilA	818179..819453 (-)	1275	WP_102838921.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G34_RS03685 (I6G34_03685)	-	819681..821033 (+)	1353	WP_102838922.1	pitrilysin family protein	-
I6G34_RS03690 (I6G34_03690)	-	821026..822558 (+)	1533	WP_102838923.1	pitrilysin family protein	-
I6G34_RS03695 (I6G34_03695)	rsmD	822558..823160 (+)	603	WP_102838924.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G34_RS03700 (I6G34_03700)	-	823172..823576 (-)	405	WP_013984344.1	hypothetical protein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45228.58 Da
• Isoelectric Point: 4.6567

>NTDB_id=513453 I6G34_RS03680 WP_102838921.1 818179..819453(-) (pilA) [Stutzerimonas frequens strain FDAARGOS_877]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPAPAEQPAAEQPDSESVEQTGAPVESPVATPQEEQPARVVEADMQPAEVIE
PVLLHPEPEPEPEPEPEPEPVPAPVVATAPEAPTKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLL
TADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKLAK
KLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVVAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLME
ELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTKQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGE
GIDDLRTFEADAFVKALFSQREDA

Nucleotide

• Length: 1275 bp

>NTDB_id=513453 I6G34_RS03680 WP_102838921.1 818179..819453(-) (pilA) [Stutzerimonas frequens strain FDAARGOS_877]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGTGAAAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCGCAGCCCGCGCCGGCAGAGCAGCCCGCCGCCGAACAGCCGGACAGCGAATCGGTCGAGCAGACCGGGGCGCCTGTCG
AATCGCCTGTCGCTACACCTCAGGAAGAGCAGCCGGCGCGCGTGGTCGAGGCCGATATGCAGCCGGCTGAGGTCATAGAG
CCGGTGCTGCTGCACCCTGAACCTGAACCCGAACCCGAACCCGAACCCGAACCGGAGCCGGTACCTGCCCCGGTCGTGGC
GACCGCGCCGGAGGCCCCAACCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGGCTGTCGAAAACCAGCGCCAGCATTG
GCGAAGGTATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAATTGGAAACCCGCCTGCTC
ACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAATCTCACCCGGCGCGTCTCGCGCAAGGAGTTGGCCGA
CAGCGGCGCGCTCTACACCGCGCTGCAGGAAGAGCTTGTTGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATG
CTGGCAAGCGCCCGTATGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAG
AAGCTGCAGCTCGACGGCAAGAAGGTCATGCTCGCCGCCGGCGACACCTTCCGCGCCGCGGCGGTGGAGCAGCTGCAGGT
GTGGGGCGAGCGCAACGGCATTCCGGTGGTCGCCCAGCACACCGGTGCCGATTCCGCCTCGGTGATCTTCGATGCCGTGC
AGGCGGCCAAGGCGCGTGGCATCGACGTGCTGATCGCCGACACCGCGGGCCGACTGCATACCAAGGACAACCTGATGGAA
GAGCTGAAGAAAGTCCGTCGGGTGATGGGCAAACTCGACGAGTCGGCTCCCCACGAGGTCCTGCTGGTACTCGACGCCGG
CACTGGCCAGAACGCCATCAACCAGACCAAGCAGTTCAATCAGGCGGTCGAGCTGACCGGGCTGGCACTGACCAAGCTCG
ACGGCACCGCCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTGGGTGAA
GGCATCGACGATCTGCGCACCTTCGAGGCTGATGCCTTCGTCAAGGCGCTGTTCTCCCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (219-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.292	100	0.493