Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   KUU74_RS28045 Genome accession   NZ_CP078009
Coordinates   6015604..6016200 (-) Length   198 a.a.
NCBI ID   WP_003095839.1    Uniprot ID   G3XD30
Organism   Pseudomonas aeruginosa strain FAHZU31     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 6010604..6021200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KUU74_RS28020 (KUU74_28015) - 6011985..6012071 (-) 87 Protein_5565 pilus assembly protein PilP -
  KUU74_RS28025 (KUU74_28020) - 6012422..6013147 (+) 726 WP_203023644.1 Bro-N domain-containing protein -
  KUU74_RS28030 (KUU74_28025) - 6013144..6014508 (+) 1365 WP_203023646.1 ISL3 family transposase -
  KUU74_RS28035 (KUU74_28030) pilP 6014532..6014987 (-) 456 Protein_5568 type 4a pilus biogenesis lipoprotein PilP -
  KUU74_RS28040 (KUU74_28035) pilO 6014984..6015607 (-) 624 WP_003103268.1 type 4a pilus biogenesis protein PilO Machinery gene
  KUU74_RS28045 (KUU74_28040) pilN 6015604..6016200 (-) 597 WP_003095839.1 type 4a pilus biogenesis protein PilN Machinery gene
  KUU74_RS28050 (KUU74_28045) pilM 6016200..6017264 (-) 1065 WP_003110888.1 type IV pilus assembly protein PilM Machinery gene
  KUU74_RS28055 (KUU74_28050) - 6017449..6019920 (+) 2472 WP_003095841.1 penicillin-binding protein 1A -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22213.55 Da        Isoelectric Point: 10.0895

>NTDB_id=513416 KUU74_RS28045 WP_003095839.1 6015604..6016200(-) (pilN) [Pseudomonas aeruginosa strain FAHZU31]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK

Nucleotide


Download         Length: 597 bp        

>NTDB_id=513416 KUU74_RS28045 WP_003095839.1 6015604..6016200(-) (pilN) [Pseudomonas aeruginosa strain FAHZU31]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGCTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA

Domains

Predicted by InterProScan.

Fimbrial assembly protein (PilN) (PilN)

(100-177)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5EOU

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Legionella pneumophila strain ERS1305867

41.714

88.384

0.369