Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6G39_RS00710 Genome accession   NZ_CP065712
Coordinates   153456..154121 (+) Length   221 a.a.
NCBI ID   WP_059107058.1    Uniprot ID   -
Organism   Staphylococcus auricularis strain FDAARGOS_882     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 148456..159121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G39_RS00685 (I6G39_00685) - 148694..149461 (-) 768 WP_059107054.1 thiazole synthase -
  I6G39_RS00690 (I6G39_00690) thiS 149463..149663 (-) 201 WP_059107055.1 sulfur carrier protein ThiS -
  I6G39_RS00695 (I6G39_00695) thiO 149647..150768 (-) 1122 WP_059107104.1 glycine oxidase ThiO -
  I6G39_RS00700 (I6G39_00700) - 150768..151349 (-) 582 WP_059107056.1 thiamine phosphate synthase -
  I6G39_RS00705 (I6G39_00705) xylB 151634..153139 (-) 1506 WP_059107057.1 xylulokinase -
  I6G39_RS00710 (I6G39_00710) braR 153456..154121 (+) 666 WP_059107058.1 response regulator transcription factor Regulator
  I6G39_RS00715 (I6G39_00715) braS 154135..155028 (+) 894 WP_180991909.1 HAMP domain-containing sensor histidine kinase Regulator
  I6G39_RS00720 (I6G39_00720) - 155132..155881 (+) 750 WP_059107060.1 ABC transporter ATP-binding protein -
  I6G39_RS00725 (I6G39_00725) - 155883..157868 (+) 1986 WP_059107061.1 ABC transporter permease -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25731.45 Da        Isoelectric Point: 4.5414

>NTDB_id=513388 I6G39_RS00710 WP_059107058.1 153456..154121(+) (braR) [Staphylococcus auricularis strain FDAARGOS_882]
MKILIVEDDFTIAESLQNELSKWHYDVMIAEDFNEIMSLFQSYDPHLVVLDITLPSFNGYHWCQEIRKTSNVPILFISSQ
SDDMDKIMAIQMGADDYIEKPFSLSLATAKIQALIRRTYNFAVDKNELEVKGCILSLDEAKVSYEDQTEQLSFTELQILS
LLFQHEGQYVSRTALIEKCWESEYFIDDNTLAVNMTRLRKKLRRLGLEDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=513388 I6G39_RS00710 WP_059107058.1 153456..154121(+) (braR) [Staphylococcus auricularis strain FDAARGOS_882]
ATGAAAATTCTCATTGTCGAAGACGATTTTACCATTGCTGAAAGTTTACAAAATGAACTTAGTAAATGGCACTATGATGT
AATGATCGCCGAAGATTTTAATGAAATCATGAGTCTTTTTCAATCATATGACCCACATCTCGTTGTGTTAGATATTACGT
TACCATCATTTAACGGTTATCATTGGTGCCAAGAAATACGTAAAACGTCCAATGTGCCGATACTCTTTATTAGTTCACAA
TCGGATGATATGGATAAGATCATGGCGATACAAATGGGAGCCGATGACTATATCGAAAAGCCGTTTAGTTTATCTCTCGC
AACGGCGAAAATCCAAGCGCTCATACGACGGACTTATAATTTTGCAGTCGACAAAAATGAACTCGAAGTGAAAGGTTGTA
TCTTATCACTCGATGAAGCAAAAGTGTCATACGAAGATCAAACTGAACAACTATCATTTACAGAATTACAAATTCTGTCA
TTATTATTCCAACATGAAGGTCAGTATGTAAGTCGTACCGCACTCATCGAAAAATGCTGGGAATCTGAGTATTTTATCGA
TGACAATACGCTTGCAGTAAACATGACACGGTTACGTAAGAAATTACGTCGTCTAGGGTTAGAGGACTTTATTCAAACAA
AGAAAAATGTAGGGTATAAAGTGTAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-220)

Response regulator receiver domain (Response_reg)

(3-110)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

71.946

100

0.719