Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I6G40_RS01675 | Genome accession | NZ_CP065711 |
| Coordinates | 357004..357978 (-) | Length | 324 a.a. |
| NCBI ID | WP_015900415.1 | Uniprot ID | B9DNP2 |
| Organism | Staphylococcus carnosus strain FDAARGOS_883 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 352004..362978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G40_RS01640 (I6G40_01640) | gcvT | 352495..353589 (-) | 1095 | WP_015900410.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| I6G40_RS01645 (I6G40_01645) | - | 353780..354319 (-) | 540 | WP_015900411.1 | shikimate kinase | - |
| I6G40_RS01650 (I6G40_01650) | comGF | 354490..354948 (-) | 459 | WP_158297486.1 | competence type IV pilus minor pilin ComGF | - |
| I6G40_RS01655 (I6G40_01655) | - | 354905..355201 (-) | 297 | WP_041612977.1 | hypothetical protein | - |
| I6G40_RS01660 (I6G40_01660) | - | 355182..355595 (-) | 414 | WP_231635362.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| I6G40_RS01665 (I6G40_01665) | comGC | 355615..355941 (-) | 327 | WP_015900413.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6G40_RS01670 (I6G40_01670) | comGB | 355959..357032 (-) | 1074 | WP_015900414.1 | competence type IV pilus assembly protein ComGB | - |
| I6G40_RS01675 (I6G40_01675) | comGA | 357004..357978 (-) | 975 | WP_015900415.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6G40_RS01680 (I6G40_01680) | - | 358049..358672 (-) | 624 | WP_015900416.1 | MBL fold metallo-hydrolase | - |
| I6G40_RS01685 (I6G40_01685) | - | 358672..359001 (-) | 330 | WP_015900417.1 | MTH1187 family thiamine-binding protein | - |
| I6G40_RS01690 (I6G40_01690) | - | 359001..359987 (-) | 987 | WP_015900418.1 | ROK family glucokinase | - |
| I6G40_RS01695 (I6G40_01695) | - | 359987..360187 (-) | 201 | WP_015900419.1 | YqgQ family protein | - |
| I6G40_RS01700 (I6G40_01700) | - | 360168..361628 (-) | 1461 | WP_015900420.1 | rhomboid family intramembrane serine protease | - |
| I6G40_RS01705 (I6G40_01705) | - | 361645..362187 (-) | 543 | WP_015900421.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36963.71 Da Isoelectric Point: 7.1254
>NTDB_id=513359 I6G40_RS01675 WP_015900415.1 357004..357978(-) (comGA) [Staphylococcus carnosus strain FDAARGOS_883]
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRIAGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAQIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHNHTMPKHFMKLSKVLTQMSEEGVICEEVL
KKYT
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRIAGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAQIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHNHTMPKHFMKLSKVLTQMSEEGVICEEVL
KKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=513359 I6G40_RS01675 WP_015900415.1 357004..357978(-) (comGA) [Staphylococcus carnosus strain FDAARGOS_883]
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTCAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGGGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGTTCTGGAAAAAGTACTATGATGTATGAAATGGTTTCTTTTGCTTTAAAAAATTTGCATCTAAAT
ATTATTACTGTTGAAGACCCAGTTGAGAAAAGAATTGCTGGCATTACTCAAATTTCAGTAAATGAGAAAGCAGGTATAGA
TTATGAAAATTCATTTAAAGCTATATTACGCTGTGATCCCGATATTATACTTATTGGGGAGATAAGAGATGCTCAAATCG
CAAAATGTGTTATTCAAGCATCTCTAAGCGGACATCTAGTGCTTTCCACTTTGCATTCAAATGATTGCGAAGGAGCATTA
TTACGACTCTTGGAAATGGGTATATCTCCACAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTAGTAAC
TAATCAACATGGAAGTAGAGAACTAGCTTATGAAACGATGTATCAATCTGATATTCAATACTTCTTCAAACATAACCATA
CAATGCCTAAACATTTTATGAAATTAAGCAAAGTACTAACTCAAATGAGTGAAGAAGGTGTTATATGTGAAGAAGTACTT
AAAAAATATACATAA
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTCAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGGGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGTTCTGGAAAAAGTACTATGATGTATGAAATGGTTTCTTTTGCTTTAAAAAATTTGCATCTAAAT
ATTATTACTGTTGAAGACCCAGTTGAGAAAAGAATTGCTGGCATTACTCAAATTTCAGTAAATGAGAAAGCAGGTATAGA
TTATGAAAATTCATTTAAAGCTATATTACGCTGTGATCCCGATATTATACTTATTGGGGAGATAAGAGATGCTCAAATCG
CAAAATGTGTTATTCAAGCATCTCTAAGCGGACATCTAGTGCTTTCCACTTTGCATTCAAATGATTGCGAAGGAGCATTA
TTACGACTCTTGGAAATGGGTATATCTCCACAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTAGTAAC
TAATCAACATGGAAGTAGAGAACTAGCTTATGAAACGATGTATCAATCTGATATTCAATACTTCTTCAAACATAACCATA
CAATGCCTAAACATTTTATGAAATTAAGCAAAGTACTAACTCAAATGAGTGAAGAAGGTGTTATATGTGAAGAAGTACTT
AAAAAATATACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.681 |
99.691 |
0.605 |
| comGA | Staphylococcus aureus N315 |
60.681 |
99.691 |
0.605 |