Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   I6G41_RS08975 Genome accession   NZ_CP065710
Coordinates   1731785..1732828 (-) Length   347 a.a.
NCBI ID   WP_002507205.1    Uniprot ID   -
Organism   Staphylococcus equorum strain FDAARGOS_884     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1726785..1737828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G41_RS08945 (I6G41_08945) - 1727226..1728464 (-) 1239 WP_002507211.1 aminopeptidase -
  I6G41_RS08950 (I6G41_08950) - 1728480..1728662 (-) 183 WP_226956897.1 DUF1128 family protein -
  I6G41_RS08955 (I6G41_08955) - 1728818..1729282 (+) 465 WP_002507209.1 low molecular weight protein-tyrosine-phosphatase -
  I6G41_RS08960 (I6G41_08960) - 1729289..1729573 (+) 285 WP_002507208.1 hypothetical protein -
  I6G41_RS08965 (I6G41_08965) - 1729804..1730970 (+) 1167 WP_002511391.1 YihY/virulence factor BrkB family protein -
  I6G41_RS08970 (I6G41_08970) vraR 1731166..1731795 (-) 630 WP_002507206.1 response regulator transcription factor Regulator
  I6G41_RS08975 (I6G41_08975) vraS 1731785..1732828 (-) 1044 WP_002507205.1 sensor histidine kinase Regulator
  I6G41_RS08980 (I6G41_08980) liaF 1732825..1733526 (-) 702 WP_002507204.1 cell wall-active antibiotics response protein LiaF -
  I6G41_RS08985 (I6G41_08985) - 1733543..1733929 (-) 387 WP_002507203.1 hypothetical protein -
  I6G41_RS08990 (I6G41_08990) map 1734034..1734786 (-) 753 WP_002507202.1 type I methionyl aminopeptidase -
  I6G41_RS08995 (I6G41_08995) - 1734966..1735952 (+) 987 WP_002507201.1 FUSC family protein -
  I6G41_RS09000 (I6G41_09000) - 1736051..1736770 (-) 720 WP_002507200.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39999.35 Da        Isoelectric Point: 5.6412

>NTDB_id=513343 I6G41_RS08975 WP_002507205.1 1731785..1732828(-) (vraS) [Staphylococcus equorum strain FDAARGOS_884]
MNHYIRAIGSMLILVYSTFFALFFIDKVFVNIVYFQGMFYTQIFGIPVLLFLNLLVIFLCIIVGSVLAYKINQQNHWLQD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETQLEAPLDQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLKKKVPMKVVHDI
EEFEVPKGIEDHLFRITQEALSNTLRHSKGTKVTVELFNMADYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=513343 I6G41_RS08975 WP_002507205.1 1731785..1732828(-) (vraS) [Staphylococcus equorum strain FDAARGOS_884]
ATGAATCACTACATAAGAGCAATAGGATCCATGTTGATATTAGTTTATAGCACATTTTTTGCTCTGTTTTTTATCGATAA
AGTATTTGTAAACATAGTATATTTTCAAGGTATGTTTTATACACAAATTTTTGGAATACCAGTTTTACTATTTTTAAACT
TATTAGTTATTTTTCTTTGTATTATTGTAGGATCGGTATTAGCATATAAAATAAATCAACAAAATCACTGGTTACAAGAC
CAAATAGAACGTTCTATTGAAGGTCAAACAGTAGGTATTAATGATCAAAACATTGAATTATATAATGAAACAATTGAATT
GTATCAAACGTTAGTTCCATTAAATCAAGAAGTTCACAAATTACGTATGAAAACGCAAAACTTAACAAATGAATCATATA
ATATAAATGATGTGAAAGTTAAAAAGATTATAGAAGATGAACGACAAAGGCTTGCACGTGAATTACACGATTCAGTAAGT
CAGCAATTATTTGCAGCGAGTATGATGCTTTCAGCTATTAAAGAAACACAGTTAGAAGCACCTTTAGATCAACAAATTCC
GATATTAGAAAAAATGGTACAAGATTCTCAGTTAGAGATGAGAGCTTTACTATTACATTTAAGACCTATTGGATTAAAAG
ACAAATCATTAGGTGAAGGTATTAAAGATTTAGTCGTTGATTTAAAGAAAAAAGTACCTATGAAAGTTGTACATGATATT
GAAGAATTTGAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACGCAAGAAGCTTTATCTAATACTTTGAGACA
TTCAAAAGGTACCAAAGTAACAGTAGAATTGTTTAATATGGCAGATTACTTATTATTACGCATTCAAGACAATGGTAAAG
GGTTCAATGTTGATGATAAGGTAGAACAAAGTTATGGTTTAAAAAACATGAGAGAACGTGCGCTTGAAATTGGTGCAACG
TTTCATATTGTTTCTTTACCAGATTCAGGTACAAGAATTGAAGTAAAGGCACCATTAAATAAGGAGGATTCATATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.473

100

0.885