Detailed information NTG0051325

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: Y1U_RS03990
• Genome accession: NC_017927
• Coordinates: 752227..753108 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus MN-ZLW-002
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 747227..758108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Y1U_RS09705	-	748237..748689 (+)	453	WP_050983521.1	hypothetical protein	-
Y1U_RS09710	-	748679..749182 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
Y1U_RS03970 (Y1U_C0761)	galE	749197..750210 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
Y1U_RS03975 (Y1U_C0762)	-	750398..750634 (+)	237	WP_002946959.1	DUF1146 family protein	-
Y1U_RS03980 (Y1U_C0763)	murA	750704..751975 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
Y1U_RS03985 (Y1U_C0764)	-	751977..752165 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
Y1U_RS03990 (Y1U_C0765)	endA	752227..753108 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
Y1U_RS03995 (Y1U_C0766)	-	753180..753830 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
Y1U_RS04000 (Y1U_C0767)	-	753842..754540 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
Y1U_RS04005 (Y1U_C0768)	-	754558..755391 (-)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
Y1U_RS04010 (Y1U_C0769)	-	755403..756170 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
Y1U_RS04015 (Y1U_C0770)	vicR	756697..757404 (+)	708	WP_014727438.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=51325 Y1U_RS03990 WP_011681210.1 752227..753108(+) (endA) [Streptococcus thermophilus MN-ZLW-002]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=51325 Y1U_RS03990 WP_011681210.1 752227..753108(+) (endA) [Streptococcus thermophilus MN-ZLW-002]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594