Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   I6G43_RS08700 Genome accession   NZ_CP065706
Coordinates   1814509..1815546 (-) Length   345 a.a.
NCBI ID   WP_000730769.1    Uniprot ID   A0A428IB40
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1809509..1820546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS08675 (I6G43_08675) - 1810387..1811718 (-) 1332 WP_000390050.1 hemolysin family protein -
  I6G43_RS08680 (I6G43_08680) endA 1811859..1812683 (-) 825 WP_001036766.1 DNA/RNA non-specific endonuclease Machinery gene
  I6G43_RS08685 (I6G43_08685) - 1812724..1812930 (-) 207 WP_000828205.1 DNA-directed RNA polymerase subunit beta -
  I6G43_RS08690 (I6G43_08690) murA 1812917..1814200 (-) 1284 WP_000411923.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6G43_RS08695 (I6G43_08695) - 1814223..1814453 (-) 231 WP_002892633.1 DUF1146 family protein -
  I6G43_RS08700 (I6G43_08700) sepM 1814509..1815546 (-) 1038 WP_000730769.1 SepM family pheromone-processing serine protease Regulator
  I6G43_RS08705 (I6G43_08705) coaD 1815530..1816018 (-) 489 WP_001280709.1 pantetheine-phosphate adenylyltransferase -
  I6G43_RS08710 (I6G43_08710) rsmD 1816008..1816547 (-) 540 WP_000706947.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6G43_RS08715 (I6G43_08715) asnA 1816612..1817604 (-) 993 WP_000747987.1 aspartate--ammonia ligase -
  I6G43_RS08720 (I6G43_08720) - 1817713..1818396 (-) 684 WP_001076875.1 Bax inhibitor-1/YccA family protein -
  I6G43_RS08725 (I6G43_08725) - 1818451..1819191 (-) 741 WP_004246533.1 TrmH family RNA methyltransferase -
  I6G43_RS08730 (I6G43_08730) - 1819225..1819503 (+) 279 WP_001174620.1 acylphosphatase -
  I6G43_RS08735 (I6G43_08735) yidC 1819581..1820501 (+) 921 WP_025168371.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37591.86 Da        Isoelectric Point: 5.5345

>NTDB_id=513243 I6G43_RS08700 WP_000730769.1 1814509..1815546(-) (sepM) [Streptococcus oralis strain FDAARGOS_886]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRQVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAQETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTENSTFKGILNIADTVTAVNDKTF
DSSKDLIDYVNSQKLGDPVKVTYEEDGRVKTAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKKNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=513243 I6G43_RS08700 WP_000730769.1 1814509..1815546(-) (sepM) [Streptococcus oralis strain FDAARGOS_886]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
ATACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCAAGTTTTAAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTGACAGTTGGGATTCGACATGCAACCCTGTCGCATCTTGTCTATGCTTGGTTAACACCTTTCACG
GATATTAGAAGCGCTCAGGAGACTACGGGTGGCTCTACTGATGCAGAGTTTATGCGGATCAATCAGTTCTACATGCAAAC
TTCTCAAAACATGGCCAAGTATCAAGGCTTGAAGACGGCTGGCAAGGATATAGAACTCAAGTACCTGGGAGTCTATGTCT
TGACCGTGACAGAAAATTCAACTTTTAAGGGCATTCTGAACATTGCGGATACAGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACCTGATTGATTATGTCAACTCTCAAAAACTAGGGGATCCAGTCAAGGTAACCTACGAAGAAGACGG
AAGAGTCAAGACTGCTGAAGGTAAAATTATCACTCTTGAAAACGGGAAAAACGGGATTGGGATTGGTTTAATTGACCGTA
CGGAAGTGACCAGTGATGTTCCAATTCGCTTTTCAACAGCTGGTATCGGGGGTCCAAGTGCAGGTCTCATGTTTAGCCTA
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGCCGCATCGTTGCGGGAACGGGAACTATTGATCGCGATGG
AAATGTTGGCGATATTGGTGGAATTGACAAAAAAGTAGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCGAAAAAAGCAGATCCCAATGCGAAAAGCAACTATGAAACAGCCTTAGAAGCTGCTAAA
ACCATCAAGACAGAGATGAAAATCGTTCCCGTAAAAACCTTACAAGATGCGATTGATTACCTCAAAAAGAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A428IB40

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.526

99.13

0.6