Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6G43_RS08295 Genome accession   NZ_CP065706
Coordinates   1727616..1728347 (-) Length   243 a.a.
NCBI ID   WP_038805774.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1722616..1733347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS08260 (I6G43_08260) - 1722704..1723003 (-) 300 WP_001041396.1 YlxQ-related RNA-binding protein -
  I6G43_RS08265 (I6G43_08265) rnpM 1722996..1723289 (-) 294 WP_000857568.1 RNase P modulator RnpM -
  I6G43_RS08270 (I6G43_08270) nusA 1723311..1724447 (-) 1137 WP_000032278.1 transcription termination factor NusA -
  I6G43_RS08275 (I6G43_08275) rimP 1724491..1724970 (-) 480 WP_000338692.1 ribosome maturation factor RimP -
  I6G43_RS08280 (I6G43_08280) trmB 1725096..1725731 (-) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6G43_RS08285 (I6G43_08285) ccrZ 1725728..1726522 (-) 795 WP_038805772.1 cell cycle regulator CcrZ -
  I6G43_RS08290 (I6G43_08290) - 1726570..1727619 (-) 1050 WP_038805773.1 ABC transporter permease -
  I6G43_RS08295 (I6G43_08295) pptA 1727616..1728347 (-) 732 WP_038805774.1 ABC transporter ATP-binding protein Regulator
  I6G43_RS08300 (I6G43_08300) - 1728415..1728825 (+) 411 WP_038805775.1 HIT family protein -
  I6G43_RS08305 (I6G43_08305) - 1728835..1729113 (+) 279 WP_038805776.1 hypothetical protein -
  I6G43_RS08310 (I6G43_08310) - 1729177..1729836 (+) 660 WP_038805777.1 hypothetical protein -
  I6G43_RS08315 (I6G43_08315) dnaJ 1729915..1731051 (-) 1137 WP_038805778.1 molecular chaperone DnaJ -
  I6G43_RS08320 (I6G43_08320) - 1731211..1731843 (-) 633 WP_038805779.1 DJ-1/PfpI family protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27239.76 Da        Isoelectric Point: 4.9078

>NTDB_id=513236 I6G43_RS08295 WP_038805774.1 1727616..1728347(-) (pptA) [Streptococcus oralis strain FDAARGOS_886]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIDQKAAFERVELLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPALFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGKLQQLREAFDMPEASLNDIYLALTKE
EDR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=513236 I6G43_RS08295 WP_038805774.1 1727616..1728347(-) (pptA) [Streptococcus oralis strain FDAARGOS_886]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGGTTGATTGGTCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGAGAAATCAAGATTAATGGTCTCACCCTGCGAGAAGATGCGACCAACTACCGCAAACAGATTGGCTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAACATATCGAAACGGTTGCTATGGCATATGGTATCGATCAGAA
AGCGGCTTTTGAGCGAGTAGAACTCTTGTTAAAAATGTTTCGTCTGGACCAAAAATTAGACTGGTTTCCTGTCCATTTCT
CCAAAGGGATGAAGCAAAAGGTTATGATTATCTGTGCTTTTGTGGTAGATCCAGCTCTCTTTATCGTGGATGAGCCTTTT
CTTGGTCTCGATCCCTTGGCGATTGCCGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCCATCCTCAT
GAGCACCCACGTGCTGGACTCTGCGGAAAAGATGTGTGACGCCTTTGTTATCCTCCACAAGGGAGAGGTGCGGGCTCAGG
GGAAACTCCAGCAACTCCGCGAGGCCTTTGACATGCCCGAGGCTAGCTTGAACGACATTTACTTGGCTCTGACCAAAGAG
GAGGACCGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708