Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   I6G43_RS02820 Genome accession   NZ_CP065706
Coordinates   603577..603870 (+) Length   97 a.a.
NCBI ID   WP_050562754.1    Uniprot ID   A0A7T3DUD8
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 598577..608870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS02790 (I6G43_02790) - 598823..599719 (+) 897 Protein_534 HAD family hydrolase -
  I6G43_RS02795 (I6G43_02795) - 599809..600564 (+) 756 WP_038806360.1 hypothetical protein -
  I6G43_RS02800 (I6G43_02800) - 600609..602210 (+) 1602 WP_038806474.1 type I restriction-modification system subunit M -
  I6G43_RS02805 (I6G43_02805) - 602314..602717 (+) 404 Protein_537 DUF1722 domain-containing protein -
  I6G43_RS02810 (I6G43_02810) - 602701..603066 (+) 366 WP_038806359.1 TIGR02328 family protein -
  I6G43_RS02815 (I6G43_02815) - 603222..603587 (+) 366 WP_038806358.1 type II toxin-antitoxin system RelE/ParE family toxin -
  I6G43_RS02820 (I6G43_02820) HI0659 603577..603870 (+) 294 WP_050562754.1 helix-turn-helix domain-containing protein Machinery gene
  I6G43_RS02825 (I6G43_02825) metE 604131..606380 (+) 2250 WP_038806357.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  I6G43_RS02830 (I6G43_02830) metF 606444..607310 (+) 867 WP_038806356.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10757.47 Da        Isoelectric Point: 6.3903

>NTDB_id=513212 I6G43_RS02820 WP_050562754.1 603577..603870(+) (HI0659) [Streptococcus oralis strain FDAARGOS_886]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARREKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=513212 I6G43_RS02820 WP_050562754.1 603577..603870(+) (HI0659) [Streptococcus oralis strain FDAARGOS_886]
ATGAAGAATAGTGCTATTGGAAGTAATTGGAAAGATGTCCGCTCTGAGCTCTTCACTAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTAGCTATTATGAGTGAATTGATTGAAGCTAGACGTGAGAAAGGAATTAGTCAGAAAAAGCTAGAAGAACTTA
GTGGAGTGAGTCAGCCTGTCATAGCTAGGATGGAAACAGGCAAGACTAGCCCTCAATTGGATACGGTCTTAAAAGTTTTA
GCCAGTTTGGGAAAGACACTAGCAGTCGTTCCACTTGAACAGGAAAAAAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3DUD8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557