Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6G43_RS02040 Genome accession   NZ_CP065706
Coordinates   415830..417590 (+) Length   586 a.a.
NCBI ID   WP_038806429.1    Uniprot ID   A0A7T3DVH3
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 410830..422590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS02020 (I6G43_02020) - 411971..412687 (+) 717 WP_038806433.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6G43_RS02025 (I6G43_02025) - 412735..413433 (-) 699 WP_038806432.1 DUF308 domain-containing protein -
  I6G43_RS02030 (I6G43_02030) - 413626..414087 (+) 462 WP_038806431.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6G43_RS02035 (I6G43_02035) rcrP 414071..415840 (+) 1770 WP_038806430.1 ABC transporter ATP-binding protein Regulator
  I6G43_RS02040 (I6G43_02040) rcrQ 415830..417590 (+) 1761 WP_038806429.1 ABC transporter ATP-binding protein Regulator
  I6G43_RS02045 (I6G43_02045) - 417687..418190 (+) 504 WP_000800930.1 phosphatase PAP2 family protein -
  I6G43_RS02050 (I6G43_02050) - 418304..418750 (+) 447 WP_000776584.1 LytTR family DNA-binding domain-containing protein -
  I6G43_RS02055 (I6G43_02055) - 418756..419430 (+) 675 WP_000725706.1 LiaF transmembrane domain-containing protein -
  I6G43_RS02060 (I6G43_02060) rpmB 419536..419724 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6G43_RS02065 (I6G43_02065) - 419876..420241 (+) 366 WP_000216441.1 Asp23/Gls24 family envelope stress response protein -
  I6G43_RS02070 (I6G43_02070) - 420244..421911 (+) 1668 WP_000036686.1 DAK2 domain-containing protein -
  I6G43_RS02075 (I6G43_02075) - 422036..422242 (+) 207 WP_038806428.1 hypothetical protein -
  I6G43_RS02080 (I6G43_02080) - 422239..422433 (+) 195 WP_038806427.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64491.31 Da        Isoelectric Point: 5.2168

>NTDB_id=513204 I6G43_RS02040 WP_038806429.1 415830..417590(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_886]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIAGFLVVLYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGAVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLSKMKGEVVFDQVSFGYTPEKTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTGISDERMMEVSKAVGIHHFIMTLPDGYDTILDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=513204 I6G43_RS02040 WP_038806429.1 415830..417590(+) (rcrQ) [Streptococcus oralis strain FDAARGOS_886]
ATGGAAAATAAAAAAGTGTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTTCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGTATCATCACAGTTTATGGGCCAACTAAGATTAAGGAAATTACAAACTTGATTTCAGATG
GTTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTGGATTTTTGGTTGTCCTATATGTGTTTGGAGCTATC
CTTAACTATACACAGGCCTATATCTTTTCAACGAGTATCCAACATTTCTCGAAACGTTTGAGGACAGCAATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGATACCCTTTCGCGCGTGACCAATGATGTGGATA
CGGCGGCACAATCTCTCAACCAAAGTTTAGGGGCAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCATTGGTAACCGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ACAATGTTGTAACCAGCTACAACGCAGTAGACACCTCCAAAGCGAGATTTGCAGGTTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGTGCCGCGCTTGCTCTAGAAGGGCATATCAGTATCGGGATTATTGTAGCCTTTATGGTCTATGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTTTAGCTGAAGCAGAGATGCAAGATGAATCTCATAAGGAAAGACAATTGAGCAAGATGAAGGGTGAAGTGGTTTTTGA
TCAGGTGTCATTTGGTTATACACCTGAGAAAACCATCATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAAGTCG
CTATCGTTGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGCATCGATGGTGTGGATACCAAGGACATGAAGCGTTCGGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACCATTCGAGAAAATCTCATCTACAATCAAACGGGCATCAGTGATGAACGAATGATGGAAGTCA
GCAAGGCTGTGGGAATCCACCACTTTATTATGACCTTGCCAGATGGTTACGATACTATTTTGGATGATACAGTGACCTTG
TCTGTTGGACAAAAACAACTCTTGACCATCGCTCGTGCACTTCTCAAGGATGCGCCGCTCTTGATTTTGGATGAGGCGAC
TTCTTCTGTTGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAGGGTCGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCCACTATTCGTAATGCCGACTTGATTCTTGTCATGAAAGATGGAAATATCATTGAACAAGGCAAC
CATGAGGAGCTGATGGCACAAGGTGGCTTCTACGCTGACTTGTACAATAGCCAGTTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3DVH3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666